Ochotona curzoniae (black-lipped pika): 121156701
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Entry
121156701 CDS
T11174
Symbol
IFT57
Name
(RefSeq) intraflagellar transport protein 57 homolog
KO
K04638
intraflagellar transport protein 57
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz05016
Huntington disease
ocz05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
121156701 (IFT57)
05022 Pathways of neurodegeneration - multiple diseases
121156701 (IFT57)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocz03037
]
121156701 (IFT57)
Cilium and associated proteins [BR:
ocz03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
121156701 (IFT57)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IFT57
MCPsignal
DUF745
SpecificRecomb
Mod_r
Motif
Other DBs
NCBI-GeneID:
121156701
NCBI-ProteinID:
XP_040836450
LinkDB
All DBs
Position
Unknown
AA seq
429 aa
AA seq
DB search
MAATAAVVTPSGLEDGGSRSRGEGAGEVVVERGPGAAYHMFVVMEDLVEKLKLLRYEEEF
LRKNNLKPPSRHYFALPTNPGEQFYMFCTLAAWLINKAGHPFEQPQEYDDPNATISNILS
ELRSLGRTADFPPSKLKSGYGEHVCYVLDCLAEEALKYIGFTWKRPAYPVEELEEETVPE
DDAELTLNKVDEEFVEEETDNEENFIDLNVLKAQTYRLDMSESAKQEAILEPTTDAAEWS
LEVERVLPQLKVTIRTDNKDWRIHVDQMHQHKSGIESALKETKGFLDKLHNEISRTLEKI
GSREKYINNQLEHLVQEYRAAQAQLSEAKERYQQGNGGVTERTRLLSEVTEELEKVKQEM
EEKGSSMTDGAPLVKIKQSLTKLKQETVQMDIRIGVVEHTLLQSKLKEKSNMTRDMHATV
IPESTIGSY
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgactgcggcagtggtcacaccgtcggggttagaagatggggggtctcggtcc
cgcggggaaggagccggagaggtagtcgtcgagcgggggcccggcgccgcctaccacatg
ttcgtggtgatggaggacttggtggagaagctgaagttgctccgctacgaggaggagttc
ctccggaagaacaacctgaagcccccgtccagacactattttgcactgcctacaaaccct
ggggaacagttctacatgttttgcactctggctgcttggttgattaacaaagcaggacat
ccatttgagcagcctcaagaatatgatgaccctaatgcaacaatatctaacatattatct
gaacttcggtcattggggagaacagcagattttcctccttcaaagttaaagtcaggttac
ggagagcatgtatgctatgttctcgattgtttagccgaagaagcattaaaatatattggt
ttcacgtggaaaaggccagcatacccagtagaagaattagaagaagaaactgttccagaa
gacgatgcagaattaacgctaaataaagtggatgaagaatttgtggaagaggagacagat
aatgaagaaaacttcattgatctgaatgttttaaaggcccagacctatcgtttggacatg
agcgagtctgccaaacaagaagctattttggaacccacaacagatgctgcagaatggagt
ctagaagtggaacgtgtactaccacaactaaaagtcacgattaggactgacaataaggat
tggaggattcatgttgatcaaatgcaccagcataaaagtggaattgaatctgctctgaag
gagactaagggttttttggacaaacttcacaatgaaattagtaggaccctggaaaagatt
ggcagccgagaaaagtacatcaacaatcagcttgagcacttggttcaggagtatcgtgcc
gctcaggcccagctgagtgaggcaaaggaacgataccagcagggaaatggtggtgtgacg
gaaagaaccagactcctgtctgaggttacagaagaattagaaaaggtgaaacaagaaatg
gaagaaaagggcagcagcatgactgatggtgctcctttggtgaagattaaacagagctta
acaaaattgaagcaagaaacggttcagatggacattaggattggtgtggtggaacacacc
ttactgcaatcgaagctgaaggagaagtccaacatgactagagacatgcacgcaacagtt
attccagaatcaacaatcggttcttattaa
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