Ochotona curzoniae (black-lipped pika): 121156753
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Entry
121156753 CDS
T11174
Symbol
ROBO1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04360
Axon guidance
ocz04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121156753 (ROBO1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
121156753 (ROBO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocz04515
]
121156753 (ROBO1)
Cell adhesion molecules [BR:
ocz04515
]
Immunoglobulin superfamily
ROBO family
121156753 (ROBO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Unc5_NetrinR_N
Ig_PDGFR_d4
DUF7908
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
121156753
NCBI-ProteinID:
XP_040836561
LinkDB
All DBs
Position
Unknown
AA seq
1650 aa
AA seq
DB search
MKWQHLPFLVTISLFSLSKNLLLLGQLIPDPEELERGKDHGTPTPTSDNDDNSLGYTGSR
LRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRM
LLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVALLRDDFRQNPSDVM
VAVGEPAVMECQPPRGHPEPTISWKKDGFPLDDKDERITIRGGKLMITYTRKSDAGKYIC
VGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDG
ELPKSRYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKAEASATLTVQEPPHFVVKPRDQ
VVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQR
SDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTLVLSCVATG
SPVPTILWRKDGVLVSTQDSRIKQLETGVLQIRYAKLGDTGRYTCTASTPSGEATWSAYI
EVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVTRNTVTLLWQPNLNSGATPTSYIIEAFS
HASGSSWQTVAENVKTETFAIKGLKPSAIYLFLVRAANAYGISDPSQISDPVKTQDVPPT
SQGVDHKQVQRELGNVVLHLHNPAVLSSSSIEVHWTVDQQSQYIQGYNILYRPSGAGHGD
TEWSVFEVRTPSKNSVIIPDLKKGVNYEIKVRPFFNEFQGADSEIKFAKTLEEAPSAPPQ
SVTISKNDGNGTAILVSWQPPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGSTFSVVIP
SLVPGIRYSVEVAASTGAGPGVKSEPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQPAFI
AGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQRGGEAVSSGG
RPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCTAGNGNSDSNLTTYSRPADCIANYN
NQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVNPSGQPTPYATTQLIQ
SNLSNNMSNGSGDSGEKHWKPPGPQKQEVAPVQYNIMEQNKLNKDYRANDAIPPTIPYNQ
SYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADLLPPPPAHPPPHSNSE
EYSVSVDESYDQEMPCPVPPARMYLQQDELEEDDERGPTPPVRGAASSPAAVSYSHQSTA
TLTPSPQEELQPMLQDCPEEIGHLQHQTERRRQPVSPPPPPRPISPPHTYGYISGPLVSD
MDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASEED
NISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDATGRRHFPASQCPRPT
SPVSTDSNMSAAVMPKARPAKKQKHQPGHLRREAYTDDLPPPPVPPPAIKSPTVQSKAQL
EVRPVMVPKLPSIEARTDRSSDRKGSNYKGREVLDGRQVADMRTNPGDPREAQEQPNDGK
GRGNKGAKRDLPPAKTHLIQEDILPYCRPTFPTSNNPRDPSSSSSVSSRGSGSRQREQAN
VGRRNIAEMQVLGGYERGEDNNEELEETES
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggcaacatcttccttttttggtcacgatatcactcttcagcttgtccaaaaac
ctcttgcttctgggccagctcattccagaccctgaagaactagagagggggaaagaccac
gggacgccgacccccacctctgataacgatgacaattcgctgggctacacaggctcccgt
cttcgccaggaagattttccacctcgcattgttgaacacccttcagacctaatcgtctca
aaaggagaacctgcaactttgaactgtaaagctgaaggccgccccacccccaccattgaa
tggtacaaaggaggggagagagtggagacggataaggatgaccctcgttcacaccgaatg
ttgctgcccagtggatctttatttttcttacgcatagtacatggacggaaaagtagacct
gatgaaggtgtctacgtttgtgtagcaaggaattaccttggagaagctgtgagtcacaat
gcatcgctggaggtagctttactacgggatgacttcagacaaaacccttctgatgtcatg
gtggcagtaggagagccagcggtcatggaatgccaacctccgagaggccatcctgagcct
actatctcatggaaaaaagatggctttcccttggatgacaaggatgaaagaataactata
cgaggaggaaagctcatgattacttacacccgtaagagtgacgctggcaaatacatttgt
gtcgggaccaacatggttggtgaacgtgaaagtgaagtagcagagctaactgttttagag
agaccatcatttgtgaagaggcctagtaacttagccgttactgtggatgacagtgcagaa
tttaaatgtgaggcccgaggagaccctgtgcctacagtacggtggaggaaagatgatgga
gagctgcccaaatccagatatgaaattcgagatgatcataccttgaaaattcggaaggtg
atggctggtgacatgggatcatatacctgtgttgcagaaaatatggtgggaaaagcagaa
gcatctgccactctgacagttcaagagcctccacattttgtggtgaaacctcgtgaccag
gttgttgcattgggacgaactgtgacttttcagtgtgaagcaaccggaaatcctcaacca
gccattttttggaggcgagaggggagtcagaatctgcttttctcataccagcctccacag
tcctccagccggttctcagtctcccagactggtgaccttactattaccaatgttcagcga
tctgatgttgggtattacatctgccagactttaaatgttgctggaagtatcatcacaaaa
gcatatttggaagttactgatgtgattgcagaccggcctcccccagtcattcgccaaggt
cctgtgaatcagacggtggccgtggatgggacgttagtgctcagctgtgtggccacaggc
agtccagtcccaacaattctgtggaggaaggatggagtccttgtttccacccaagattct
cgaatcaaacagctggagaccggggtgctacagatccgatatgcaaagctgggtgacact
ggtcggtacacctgcaccgcatcaacccccagcggtgaagcgacatggagtgcttacata
gaagtccaagaatttggagttccagttcaacctccaagacccactgaccccaatttaatc
cctagtgccccctcaaagcctgaagttacggatgtcaccagaaatacagtaacgttattg
tggcaaccaaatttgaattcaggagcaactcctacgtcgtatattatagaagccttcagc
catgcatctggtagcagctggcagactgtggcagagaatgtgaagacagaaacatttgcc
attaaaggactcaaacctagcgccatttaccttttccttgtgagagcagctaatgcatat
ggaattagtgacccaagccaaatatcggatccagtgaaaacacaagatgttcctccgacc
agtcagggggtggaccacaagcaagtgcagcgagagctggggaatgttgtcctgcacctg
cacaaccctgccgtcctttcttcatcctccatcgaagtgcactggacggtggatcagcag
tctcagtacatccagggctataacatcctctaccggccttcaggagccggccacggagac
actgagtggtcagtgtttgaagtgaggacgccaagcaaaaacagtgtcattatccctgat
ctcaaaaagggtgtcaactatgaaattaaagttcgccccttttttaatgaatttcagggg
gcagatagtgaaatcaagtttgccaaaaccctggaagaagcacccagtgccccgccacaa
agcgtaaccatatcaaagaacgatgggaacggaactgcaattcttgttagttggcagccc
cctccagaagacacacagaacggaatggtccaagaatacaaggtttggtgcctgggcaat
gaaactcggtatcatataaacaagacagtagatggttctactttttctgtggtcattccc
tctctggtacctgggatccgatacagcgtggaagtggccgccagcaccggagccgggcct
ggggtgaagagcgagccccagttcatccaactggattctcacggcaaccccgtgtcgcct
gaggaccaagtcagccttgcccagcagatctcggatgtggtgaagcagccggcattcatc
gcaggcattggggccgcctgttggatcatcctcatggtcttcagcatctggctctatcgg
catcgcaagaagagaaatggactcaccagcacctatgcaggcatcaggaaagtcccgtct
tttaccttcacaccaacagttacttatcagagaggaggagaagctgtgagcagcggaggg
aggccaggacttctcaacatcagtgaacctgccacacagccatggctggctgacacgtgg
ccaaacactggcaacaatcacaatgactgctccatcaactgctgcacagcaggcaacggg
aatagcgacagcaacctgacaacatacagtcgcccagctgattgtatagcaaattataac
aaccaactggataacaaacaaacaaatctgatgctccctgagtcaactgtttatggtgat
gtggaccttagtaacaaaatcaatgagatgaaaaccttcaatagcccaaatctgaaggat
gggcgttttgtcaatccatcagggcagcccacaccttacgccaccacccaactcatccag
tcaaacctcagcaataacatgagcaatggcagtggggactccggcgagaagcactggaaa
ccacctggtccgcagaagcaagaggtggcaccagttcagtataacatcatggagcagaac
aagctgaacaaagattatcgagcaaatgatgcaattcctccgactatcccctacaatcaa
tcatatgaccaaaatacaggaggatcctacaacagttcagaccggggcagtagcacatct
gggagtcaagggcacaagaagggggctcgaacacccaaggtaccaaaacagggtggcatg
aactgggcagacctgcttccccctcccccagcacaccctcccccacacagcaatagtgaa
gaatacagtgtttctgttgatgaaagctatgaccaagagatgccatgccctgtaccacca
gcaaggatgtatttacaacaagatgaattagaagaagatgatgaaagaggccccacgccc
cccgtgcggggagcagcttcatctccagcagctgtgtcctatagccatcagtccacggcc
actctgactccttcccctcaggaggagctccagcccatgttacaggactgcccggaggag
attggccacttgcagcaccagacagaaaggagacgacagcctgtgagtccgcctcctcca
ccacggccgatttccccaccacacacctatggctacatttctggacccctcgtgtcagat
atggatacggatgcgccagaagaggaagaggatgaagccgacatggaagtagccaagatg
caaaccagaaggcttctgttacgtggtctggagcagacgcctgcctccagtgttggggac
ctggagagctctgttaccggctccatgatcaatggctggggctcagcctctgaggaggac
aacatttccagtgggcgttccagcgtgagctcatccgacggctcctttttcacggatgct
gattttgcccaggcagtcgcagcagcggcagagtacgcaggtctgaaagtggcacgacgt
caaatgcaggatgcgactgggcgccgacatttccctgcctctcagtgccctcggcctaca
agcccggtgtccactgacagcaacatgagtgctgctgtaatgccgaaagccagacccgcc
aagaaacaaaaacaccagccaggacatctgcgcagagaagcctacacagatgatcttcca
cctcctccagtgccaccacctgctataaaatcacccactgtccaatccaaggcccagctg
gaggtacgacctgtaatggtgccaaaactcccttctatagaagcaagaactgacagatca
tcagatagaaaaggaagcaattacaaagggagagaagtattggatggaagacaagttgct
gacatgcgaaccaatccaggggatcccagagaagcacaggagcagccgaatgatgggaaa
ggacggggcaacaagggagcaaaacgagaccttccaccagcaaagactcatctcatccaa
gaggacattctgccgtactgtagacctacatttccaacatcaaataatccgagagatccc
agctcctcgagctcagtgtcatcaagaggatcaggaagcagacaaagagaacaagcaaat
gttggccggagaaatattgcagaaatgcaagttcttggaggatacgaaagaggagaagat
aataatgaagaattagaggaaactgaaagctga
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integrated database retrieval system
