Ochotona curzoniae (black-lipped pika): 121157330
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Entry
121157330 CDS
T11174
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocz03036
]
121157330 (CHD6)
Chromosome and associated proteins [BR:
ocz03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121157330 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
ResIII
DEAD
HTH_Hrp3
HDA2-3
MUN
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
121157330
NCBI-ProteinID:
XP_040837394
LinkDB
All DBs
Position
Unknown
AA seq
2715 aa
AA seq
DB search
MKMKIQKKEKQLSSLKVLNHSPMSDASVNFDLKSPSPFDCSTDQEEKVDDVPRHCLSQRD
VYTAEEDADTLFPSKMTSHNGMEDSGGGGTGVKKKRKKKESGEQASAAKGAKDREPKPKR
KREPKEPKEPRKAKEPRKAKEPKEPKQKDGTRKARKPREASGTKEAKEKRNCSDSTARTK
SKKASKEQGPTPVEKKKKGKRKSETTVESLELDQSLPNSSLRSAEECAESADNQKRRSGR
QVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILAS
KTVQEVHPGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKH
IFTEPDEDLFNPDYVEVDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDP
AKVKEFESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRK
NCILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYH
GSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVVIDEA
HRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFG
DLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFS
FLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQ
AAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQA
AIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSK
AVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGA
YGALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDP
NFWQKWAKIAELDTEAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPT
RSRRLNDKARRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVY
CVKHYKGDEKIKSFIWELITPTKDGQAQTLQNHSGLSAPVPRGRKGKKTKNQLLLPELKN
ADWLATCNPEVVLHDDGYKKHLKQHCNKVLLRVRMLYYLKAEILGEAADKAFEGTPAREL
DVLLPDIDYMEIPVDWWDAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKSL
SAEQGVTDGPTDIPDRGNVEKEENTEDKLDGLQKQTESPGDGGDVIFCEKKDDSRTAQDG
SDPDKSPWPASSALTARLRRLVTIYQRCNRKELCRPEIMGPGNQGYWVQEEMFRRSSEMD
LINKDAQKRWTRREQADFYRTVSSFGVIYDQEKKAFDWTQFRMISRLDKKSDESLEHYFY
SFVAMCRNVCRLPAWKDGGSPDATVYVEPITEERAARTLYRIELLRKIREQVLKCPELHE
RLQLCRPSLYLPVWWECGKHDRDLLIGTARHGLNRTDYYIMNDPQLSFLDAYRNYAQHKR
NDAQAPGGLCCLYQTNSKLYESLSYTQMSRTSESLENEPENLVKIESRDDPLSLPPNSLP
DVTCESFLSKVQDVMSINHGESRLPQSLCSKKMLCHEPGSFQESPGPSIEPRKDSVAISM
SADGSCQPGRHEAELASSPSVMGSLEARVAQMNIKDGKHLLMPVSKEGELCRSEVGQRPE
TIRQLDTTCLASPSSDPGNETGLVDAGTLSACDSKGNLSSDQQLIDILESKNLESKLILG
QNHSDEEEEEEDNEEENLNMVAGIREMPQVLQLSEPTPNILREKNRGLHVDEGQKGSLEA
GGQASGPQRVFPPAACHCQCKHMEQWARGLDCEELEGEKPEAYNPDPYNIKISNITSEGE
PIDSASEPFQVTRGLLKERWKESSDGKKGFPTYIPEASELKSEDLDFENKDDYDRDATCH
SQDYPGKYSEEESKSSASGIAGDTGDDVQEVRAPTIAQLLQEKTLYSFSEWPKDRVIINR
LDNICHVVLKGKWPSSQQYEPSGTLPSPILASSTGSRNSLSEPEAAEHSFSNGAALASQI
QKESFLAPVFAKDEHKHRRPYEFEVDRDAKARGLDPFSVAHRHPPVVLNGWHGESAIDLS
CSSEGSPGATSPFPASASTPKIGAIGSLQGALGMDLSGILQAGLIHPVTGQIVNGSLRRD
DAASRRRRGRRKHAEGGMDLIFLKEQTLQAGILEVHEDSGPAAQSTAHPEGPGPAASAPE
PATATNSQAEKAIPSRSLLDWLRQQADYSLEASGFGANFSDKPKQRRPRCKEPATVDGSS
LSREERGSAVPTDPGLRGFLPENKFNHTLAEPVLRDVGPRRRGRRPRGELLKAPAIVADS
ASGMGPLFMNGLIAGMDLVGLQNVRNVPGIPLTGLVGFPAGFATMPTGEEVKSTLSMLPM
MLPGMATVPQMFGVGGLLNAPMATPCASPAPASLSSTTNSGTAAPEKTVEDKPSSHDMKT
DTLAEDKPAPSPFSDQSEPAITTSSPVAFNPFLIPGVSPGLIYPSMFLSPGMGMALPAMQ
QARHTEAGALESQKRKKKKTKADSMNPNPDPAAGAEREPGSEQNCPESSAPLPPEREHVT
QAGGGGLKDSNDDTN
NT seq
8148 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaaaatacaaaagaaagagaagcagttgtcaagcttaaaagttctgaaccac
tccccgatgtctgatgcctctgtcaattttgacttgaaatccccatccccatttgactgc
agcactgatcaggaagagaaggttgatgatgttcctaggcactgtctgtcacagagggac
gtgtatacagccgaagaagatgcagacaccctttttcctagcaaaatgacgtcccacaac
gggatggaggacagtggaggaggggggaccggagttaagaagaaacggaagaaaaaagag
tcaggagagcaggccagtgcagcgaaaggagctaaggacagggagcccaagccaaagagg
aagcgagaacctaaagagcccaaggagccccggaaggccaaggagccccggaaggccaag
gagcccaaggagccgaagcagaaggatggaaccaggaaggcgcggaagccccgggaggcc
tcgggcaccaaggaggccaaagagaagaggaactgctccgactctacagccaggaccaag
tccaagaaggccagcaaggagcaaggaccaactcctgtggagaaaaagaagaaaggaaaa
aggaaaagtgaaaccacagtggagagcttagagctggatcagagcctgccgaactcatcc
ctgcggagtgctgaggagtgcgccgagtctgcagacaaccagaaacgacgctcaggacgt
caagtgaagcgcagaaaatacaacgaggacctggacttcaaggtggtggatgatgatggg
gaaacaattgctgtccttggagctggccggacatctgcgctctcagcctctacactggct
tggcaggcagaggagcctccagaagatgatgcaaacatcatcgagaagattctggcatcc
aagactgtccaggaggttcacccaggagaacccccgttcgacctggagctattctacgtg
aagtatagaaatttttcctacttacactgtaagtgggccacgatggaagagctcgagaag
gatcctcgcatcgcacagaagatcaagcgatttaggaataaacaagcccagatgaagcac
atttttactgagcctgatgaagacctgttcaatccagactatgtggaagttgatcgcatc
ttggaggtggcccacacgaaggatgcagaaacaggggaggaggtgacgcattacctggtg
aagtggtgctccctgccatatgaagagagcacctgggaactagaggaagatgtggatcct
gcaaaagttaaagaatttgaatctcttcaagttctccctgaaattaagcatgtggagcgg
cctgcttccgactcgtggcagaagcttgagaagtctcgcgagtacaagaacagtaaccag
ctccgggagtaccagctggaggggatgaactggcttctctttaattggtacaacaggaag
aactgtattttggctgatgaaatgggcctagggaaaaccatccagtcgatcacattcctt
tcagaaattttcctcagaggaatccacggcccatttctcatcatcgcccctctctccaca
atcacgaactgggagcgggagttcaggacgtggacggagatgaatgccatcgtctaccac
ggcagccagatcagcaggcagatgatccagcagtacgagatggtgtacagagatgcacag
ggaaaccccctttcaggagtgttcaagttccacgtcgtcatcacgacatttgagatgatc
ctggccgactgcccagagctgaagaagatccactggagctgtgtggtcatcgatgaggcc
cacagactgaagaacaggaactgcaaacttctggagggtctgaagctcatggccctggaa
cataaagtgcttctcactggaacaccgctgcagaactctgtggaggagctcttcagcttg
ttaaactttctggagccatcacaatttccttcagagacagctttcttggaggagtttgga
gacctgaaaacagaggagcaggtaaagaaactgcagtctatactaaaaccaatgatgctt
cgacggctgaaggatgacgtggagaagaacctggctcccaaacaggaaactatcattgaa
gtggagctgactaatatccagaagaagtactaccgtgccatcctggagaagaacttttca
tttctgaccaagggtgcaaatcagcacaatatgcccaatctcatcaataccatgatggag
ctgagaaagtgctgtaatcacccctacctgatcaatggggcagaggaaaaaattctggaa
gatttccgaaaaacccacagccctgatgcccctgacttccagctccaggccatgattcag
gcagcaggaaagctggtgctgattgataaactgctccctaagctgatcgctggcggccac
aaagttctcatcttctcccagatggtgcgctgcctggatatcctggaggattaccttatc
cagagaagatacacctatgagcgaattgatgggcgagtacggggaaacctgcgccaggca
gccatcgaccggttctgtaagccagactcagaccgctttgtctttcttctgtgcaccaga
gcgggaggcctggggatcaatctcacagctgctgatacctgcatcatatttgattctgac
tggaacccacaaaatgacttgcaggctcaggcccgctgtcaccgtataggccagagcaaa
gctgtgaaggtgtatcgcctcatcacccggaactcctatgagcgggaaatgtttgacaag
gccagcctaaagctgggtctggacaaggctgtgctccaggacatcaaccgaaagggcagc
accaacggagtacagcagctctcaaaaatggaggtggaagacttgctccggaaaggtgct
tatggagctttgatggacgaggaggacgaaggctccaagttctgtgaggaggacatagac
cagatcctgcaaagaagaactcacactatcaccatccagtctgaggggaaagggtccact
tttgccaaggctagctttgtagcttcaggaaacagaacagacatttctttagatgatccc
aatttttggcagaaatgggctaaaatagctgaactggacactgaagccaagaatgaaaag
gaaagcttagtgatcgaccgccctcgtgtgagaaagcagaccaaacactacaactcgttt
gaggaggatgagctcatggagttctcagagctagacagtgactcggatgaaaggccaacg
agatccaggcgcctcaatgacaaagccaggcgctacctccgagccgagtgcttccgggtg
gagaagaacctgctcatctttggttggggtcgttggaaggacatcctgactcacgggcga
ttcaagtggcatctgaacgagaaggacatggagatgatttgccgtgccctgctggtgtac
tgtgtcaagcattataagggggacgagaagatcaagagtttcatttgggaactgatcaca
cccaccaaagatgggcaggcccagaccctccagaaccactcagggttgtctgcccctgtc
cctagagggaggaaggggaagaagacaaagaaccagctgctgctcccagagctgaagaat
gcagactggctggccacgtgcaaccccgaggtggtcctgcatgatgacggctacaagaaa
cacctcaaacaacactgcaacaaggtactcttacgagtgcggatgctctactacctaaaa
gccgaaatactgggagaagcagctgataaagcatttgaaggaactcctgccagggaactg
gatgtgctcctgcccgacattgactacatggagatccccgtggactggtgggacgcagag
gccgataaatctcttctcatcggcgtattcaagcatggttatgagaggtacaatgccatg
cgggcagacccagcgctctgctttctggagaaagtcgggatgccagatgagaagtcgctt
tctgcagagcagggtgtcacagatggccccacagacatccccgacagaggcaacgtggag
aaagaagaaaatacggaggacaagttagatggcctccagaaacaaacggagagtcccggt
gacggaggtgacgtcattttctgtgaaaagaaggatgacagccggacagcccaggatggc
tccgacccagacaaatcaccctggccagcctcgtccgccctcacagctcgtctccgacgt
ctggtcaccatttaccagcgctgcaaccgcaaggaactctgccgacctgaaattatggga
ccaggtaaccaaggatactgggttcaggaagagatgttcaggagaagctcagaaatggac
ctcatcaacaaggatgcccagaagaggtggactagaagagagcaagctgacttttacaga
acagtatcttcctttggtgttatttacgatcaagaaaaaaaagcctttgactggacccag
ttccgcatgatttcgcgcttggacaagaagtccgatgagagcctggagcactatttctac
agttttgtggccatgtgccggaatgtctgtcgactgcccgcgtggaaagatggtggttcc
ccagatgccaccgtctacgttgagcccatcactgaggaacgggctgcacggacgctgtac
cgcatcgagctgttacggaagatccgagagcaagtgctcaagtgtcctgagctgcatgag
cgcctccagctgtgcaggcccagtctctacctccccgtctggtgggagtgcgggaagcac
gaccgtgacctgctcatcggcactgccaggcacgggctaaaccgcactgactattacatc
atgaatgacccccagctgtccttcttggacgcctacagaaactatgcccagcataaaaga
aacgacgcacaggccccagggggtctctgttgtctttaccagaccaacagcaaactgtat
gaatccctttcctatacccaaatgagtaggacttcagaatcccttgaaaatgaacccgag
aatctagtgaaaatagaaagcagagatgatcctctcagtctgcccccgaacagcttacct
gatgtgacttgtgaaagctttctctctaaagttcaggatgtcatgtccatcaaccatggc
gaaagtcggctgccccagtccttgtgcagtaagaagatgctctgccacgagccaggctct
tttcaggaaagcccaggccccagtatagaaccccggaaagattctgttgccatctcaatg
agcgcagatgggagctgccagcctggccgccatgaggcagaactagcttccagcccctcc
gtgatgggtagcttagaagcaagagtagcccagatgaacattaaagatggaaaacatctg
ctaatgcctgtttcaaaggaaggggagctgtgccgcagcgaggtggggcagagaccggaa
accatcaggcagttggacaccacatgcttagcttccccgtcttcggatcccggaaatgaa
actgggcttgtagatgcgggcactctcagtgcctgtgactccaaaggaaacctgtcctca
gatcagcagctgattgacatcttagaaagcaaaaatttagaaagtaaattaattctgggt
cagaaccacagtgatgaggaggaggaagaggaagacaatgaagaggaaaacttgaacatg
gtagcaggtataagggaaatgccacaggttttgcagctctctgagcccactccaaatatc
ctccgcgaaaaaaatcgaggcctccacgtggatgaaggccagaaaggaagcctggaggca
ggaggccaagcttctggaccacagagggtgtttccgccagcagcctgtcactgtcagtgc
aaacacatggagcagtgggcacggggccttgactgtgaagaattagaaggggagaagcca
gaggcttataacccggatccctacaacatcaaaatcagtaacattacttcagagggtgag
cccattgattctgcatcggagcccttccaggtgacacgtggacttttgaaagaacgttgg
aaggaaagttcagacggtaaaaaaggcttccccacatacattcccgaagcaagcgagctc
aagtcagaggacctggattttgaaaataaagatgattacgatagagatgcaacctgccat
agtcaagattatccaggaaaatactctgaagaggagagcaagagttctgcctctggcatt
gcaggagacacgggggatgacgtgcaggaggttcgcgcccccaccattgctcagctgctg
caggagaaaacgctttattccttctcagagtggccaaaggatcgtgtgataattaaccgc
ctagacaacatctgccacgtggtgttaaaggggaagtggccctccagccagcagtatgag
ccctcaggcacgttgcctagccccatcttagccagcagtactggttctcgaaacagcctc
tccgaaccagaagcagcagaacacagcttcagcaatggggcggcactggcatcccagatc
cagaaggagagcttcttggctccggtcttcgccaaggacgaacacaagcacaggcgtccc
tacgagtttgaagtggacagagatgccaaggcccggggcctggatccgttctctgtcgcc
cacaggcacccccccgttgtcctcaatggctggcatggggagtcggcgatagacctctcc
tgctcgtcagagggatccccaggagccacatctcccttcccggcaagtgccagcacccct
aagattggggctattggttcacttcagggagcccttggcatggacttgtctgggattctg
caagctggcctgatccaccccgtgactggacagattgtcaatggaagcctcagaagagat
gacgctgcctcgaggaggcggaggggcaggcggaaacatgctgaaggaggaatggacctc
atcttcctgaaggagcagacgctgcaggcagggatcttggaagttcatgaagactcaggg
ccggctgcccagagcaccgcacatcctgaagggccaggacccgctgcctcggcgcctgag
ccagccacagcgaccaacagccaggccgagaaggccattcccagcaggagcctgctggat
tggctgaggcagcaggcagactactccttggaggcttctggctttggggcaaacttttca
gacaaaccaaagcaaaggaggcctcgctgtaaagaacctgcaacagtagacggcagctct
ctgagcagggaagagaggggttctgctgtccccaccgacccaggactgagggggtttctc
ccagaaaacaagttcaatcacaccctggctgagcctgttcttcgggatgtgggcccccgc
aggagggggaggcggccccgcggcgagctcctgaaggctccagccatcgtagcggactct
gcctctggaatggggccactgttcatgaacgggctaattgcagggatggacctggtgggc
ctgcagaatgtacgaaacgtgccaggcatccccctcactgggctcgtggggttcccagcc
ggctttgccaccatgcccacaggcgaagaagtcaaaagcaccctgagcatgctgcccatg
atgctgcccggcatggccaccgtgccccagatgttcggtgtggggggcctcctcaatgca
cccatggcaactccctgtgcgtctcctgccccagcatctctgtcaagcacaacgaacagt
ggtacggcagctccagaaaagactgtggaggacaagccaagcagccacgacatgaaaaca
gacaccttagctgaagacaagcctgctcctagtccattttctgaccagtcagaacccgca
ataactaccagtagtcctgtggcttttaacccgtttctcatcccgggagtctctcctgga
ctcatttacccatccatgttcctgtcccctggcatgggcatggctctgccggccatgcag
caagccagacacacagaagcaggggctctggagagccagaagcggaagaagaagaaaacg
aaggcggacagcatgaaccccaacccagaccctgctgccggggctgagcgggagccaggc
agtgagcagaactgccccgagtccagtgcccctctgcccccggagagggaacacgtgaca
caggctgggggaggggggctcaaagattccaacgacgacaccaattag
DBGET
integrated database retrieval system
