Ochotona curzoniae (black-lipped pika): 121157369
Help
Entry
121157369 CDS
T11174
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocz03041
]
121157369 (RBM39)
Spliceosome [BR:
ocz03041
]
Common components
Common spliceosomal components
General mRNP proteins
121157369 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
POP1_C
IHO1
Motif
Other DBs
NCBI-GeneID:
121157369
NCBI-ProteinID:
XP_040837477
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAATVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagccatgcttgaggctccttacaagaaggatgagaat
aagttgagcagtgcaaacggccatgaagaacgtagcaaaaagaggaaaaaaagcaagagc
aggagtcgtagtcatgaacggaagagaagcaaaagtaaggagcggaagagaagcagagat
agagaaagaaaaaagagcaaaagccgggaaaggaagcgaagtagaagcaaagaaaggaga
cggagccgatcaagaagtcgagatcgcagattccgaggccgttaccgaagcccttactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagacgacgttcccgaagcaaaagtcccttcagaaaagacaagagcccagtgagagag
cctatagataatctaactcctgaggaaagagatgctcggacagtattctgtatgcagttg
gcagcaagaattcgaccacgggatttggaagaattcttttctacagtaggaaaggttcga
gatgtgcggatgatttctgatagaaattcacgacgttctaagggaattgcttatgtggag
tttgtcgatgtgagctcagtgcctctagcaataggattaaccggccagcgagttttagga
gtgccaatcatagtacaagcttcacaggcagaaaaaaacagagctgcagcaatggcaaac
aatttacaaaaggggagtgctggacctatgagactgtatgtgggctcattacactttaac
ataacagaagacatgcttagaggaatctttgagccttttggaaggattgaaagtatacag
ctcatgatggatagtgaaacaggtcgttcgaaaggatatggatttattacattttctgat
tcagaatgtgccaaaaaggctttagaacagctgaatggatttgaactagcgggaaggccg
atgaaggttggtcatgttactgagcgtactgatgcatccagtgctagttcatttctggat
agtgatgaactggaaaggactggaattgacttgggaacaactggtcgtctgcagttaatg
gcaagacttgcagagggtactggtttgcagattcctccagcagcacagcaagcactgcaa
atgagtggttctttggcatttggtgctgtggcagaattctcttttgttatagatttgcaa
acaagactttcccaacagactgaagcttccgctttagctgctgctgccactgttcagcca
cttgcaacacagtgtttccagctctcgaatatgtttaacccgcaaacagaagaagaagtt
ggatgggatacagaaattaaggatgatgtgattgaagaatgtaataaacatggaggagtg
attcatatttatgttgacaagaattcagctcagggcaacgtgtatgtgaagtgcccatca
attgccgcagctattgctgctgtgaatgcattgcatggcaggtggtttgctgggaaaatg
ataacagcagcatatgtacctcttccaacttatcataacctgtttcccgattctatgacg
gcaacacaacttctagtgccaagtagacgatga
DBGET
integrated database retrieval system
