Ochotona curzoniae (black-lipped pika): 121157452
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Entry
121157452 CDS
T11174
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04140
Autophagy - animal
ocz04148
Efferocytosis
ocz05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121157452 (VPS16)
04148 Efferocytosis
121157452 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121157452 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocz04131
]
121157452 (VPS16)
Membrane trafficking [BR:
ocz04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
121157452 (VPS16)
Hops complex
121157452 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
121157452
NCBI-ProteinID:
XP_040837664
LinkDB
All DBs
Position
Unknown
AA seq
870 aa
AA seq
DB search
MRTGGSGSAKLSPAACGGGLLCTAWPPPAPAMDCYTANWNPLGDSAFYRKYELYSMDWDL
KEELRDCLVAAAPYGGPIALLRNPWRKEKAASVRPVLDIYSASGMPLASLLWKSGPVVAL
GWSAEEELLCVQEDGAVLVYGLHGDFRRHFSMGNEVLQNRVLDARIFHTEFGSGVAILTG
AYRFTLSANVGDLKLRRMPEVPGLQSAPSCWTTLCQDRVAHILLAVGPDLYLLDHATCST
VTPPGLAPGVSSFLQMAVSFTYRHLALFTDTGYIWMGTTSLKEKLCEFNCNIRAPPKQMV
WCSRPRSKERAVVVAWEKRLMVVGDAPESIQFVLDEDSYLVPELDGVRIFSRSTHEFLHE
VPVASEEIFKIASMAPGALLLEAQKEYEKESQKADEYLREIQELGELTQAVQQCIEAAGH
EHRPDMQKSLLRAASFGKCFLDRFPPDSFVRMCQDLRVLNAVRDYHIGIPLTYSQYKQLT
IQVLLDRLVLRRLYPLAIQICEYLRLPEVQGVSRILAHWACYKVQQKDVSDEDVARAINQ
KLGDTPGVSYSDIAARAYGCGRTELAIKLLEYEPRSGEQVPLLLKMKRSKLALNKAIESG
DTDLVFTVLLHLKNELNRGDFFMTLRNQPMALSLYRQYCKHQELETLKDLYNQDDNHQEL
GSFHVRASYMAEERIEGRVAALQTAADAFYKAKNEFAAKATEDQMRLLRLQRRLEDELGG
QFLDLSLHDTVTTLILGGHNKRAEQLARDFRIPDKRLWWLKLTALANLEDWEELEKFSKS
KKSPIGYLPFVEICMKQHNKYEAKKYAARVGPEQKVKALLLVGDVAQAADVAIEHRNEAE
LSLVLSHCTGATDGATADKIQRARAQAQKK
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgcggacgggcggaagcggaagtgccaagctgagtcccgcagcctgtggaggtggcctt
ctctgcaccgcttggccgccacccgcaccagctatggactgctacacggcgaactggaac
ccgcttggggactctgccttttaccggaagtatgagctgtacagcatggactgggacctg
aaggaggaactcagggactgcctggtggctgccgcaccctatgggggtcccattgcactg
ctcaggaacccctggcggaaggagaaggctgccagcgtgcggccagtgctggatatctac
tctgcttcgggcatgcctctggccagcctgctgtggaagagcgggcccgtggtggccctg
ggctggtcagcggaggaggagctactgtgcgtgcaggaagatggtgcagtgcttgtctat
gggctccacggcgacttccggagacacttcagcatgggcaacgaggtactccagaaccga
gttctggatgcccgaatctttcatactgagtttggttccggggtggccatcctcacaggg
gcctaccgcttcacacttagtgccaacgtgggtgacctcaagctccgccggatgcccgag
gtgcctggtttgcagagtgcaccctcctgctggaccacactgtgccaggaccgggtggca
cacattcttctggccgtggggcctgatctttaccttctggaccatgccacctgctccacc
gtgacgccccctggcctggcccctggcgtgagcagcttcctgcagatggccgtctccttc
acctaccgacacctggcgcttttcacagacacgggctacatctggatggggaccacatca
cttaaggagaagctgtgcgagttcaactgcaacatcagggctcccccgaagcagatggtc
tggtgcagccgtcctcgtagcaaggagagggccgtcgtggtggcctgggagaagcggctg
atggtagtgggtgatgcacctgagagcatccagttcgtgctagatgaggactcttacctg
gtgcccgagctcgatggggtccgcatcttctcccgcagcacccacgagttcctacatgag
gttccagtggccagtgaagagatcttcaaaattgcctcgatggctcctggagctctgctg
ttggaggcccagaaggaatatgagaaagaaagccaaaaggcggacgaatacctgcgggag
atccaggagctgggggagctgactcaggcagtgcagcagtgcatcgaggctgcagggcac
gagcaccgtccagacatgcagaagagcctgctcagggcagcctcctttggaaaatgtttc
ctagacagatttccacctgacagcttcgtgcgcatgtgtcaggacctgcgagtgctcaat
gccgtccgtgattaccacattgggattcctctcacctacagccaatataagcagcttact
atccaggtgctgttggacagactggtgttgcggaggctttacccactggccatccagatt
tgcgagtacctgcgccttcctgaagtacagggtgtcagcaggatactggcccactgggcc
tgctacaaggtgcagcagaaagatgtgtcggatgaagatgttgctcgagccattaaccag
aagctaggggacacacctggtgtctcctactccgacattgctgcgcgggcctatggctgt
ggccgcacagagctggccatcaagctgctggaatatgagccccgctcgggggagcaggta
ccccttctcctaaagatgaaaaggagcaaattggcactgaacaaggccattgagagcggg
gacactgacctggtgttcacggtgctgctgcacctaaagaatgagctgaaccgaggagac
tttttcatgaccctccggaaccagcccatggctctgagtctgtatcgacagtattgtaag
catcaggagctagagacattgaaggacctctacaatcaggatgacaatcaccaggaactg
ggcagcttccacgtccgagccagctacatggcagaagagcggatcgagggccgagtggca
gctcttcagacagcagcagatgccttctacaaggccaagaatgagtttgcagccaaggcc
acagaggatcaaatgcgcctcctccggctgcagcggcgcctggaagatgaactagggggc
caattcctagacctgtctctgcatgacacagtcaccacgctcatccttggtggccacaac
aagcgcgcagagcagctggcacgtgacttccgcatccctgacaagaggctctggtggctg
aagctgactgccctcgccaatctagaagactgggaggagttggagaagttttctaagagc
aagaaatcacccattggctacctgccttttgtggagatctgcatgaaacaacacaacaaa
tatgaggccaagaagtatgctgcccgtgtgggtcccgagcagaaggttaaagccttactt
ctcgttggggacgtggcccaagccgcggatgtggccatcgagcaccggaatgaggccgag
ctgagcctcgtgttatcccactgcactggagccaccgatggggccacagcggacaagatt
caacgggccagggcacaagcccagaagaagtga
DBGET
integrated database retrieval system
