Ochotona curzoniae (black-lipped pika): 121157468
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Entry
121157468 CDS
T11174
Symbol
CNOT2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121157468 (CNOT2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocz03019
]
121157468 (CNOT2)
Messenger RNA biogenesis [BR:
ocz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121157468 (CNOT2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
121157468 (CNOT2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
121157468
NCBI-ProteinID:
XP_040837701
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MRTVRKGHDSMVRTDGHTLSEKRNYQVTNSMFGASRKKFVEGVDSDYHDENMYYSQSSVF
PHRSEKDMLASPSTSGQLSQFGASLYGQQSALGLPMRGMSNNTPQLNRSLSQGTQLPSHV
TPTTGVPTMSLHTPPSPSRGILPMNPRNMMNHSQVGQGIGIPSRTNSMSSSGLGSPNRSS
PSIICMPKQQPSRQPFTVNSMSGFGMNRNQAFGMNNSLSSNIFNGTDGSENVTGLDLSDF
PALADRNRREGSGNPTPLINPLAGRAPYVGMVTKPANEQSQDFSIHNEDFPALPGSSYKD
PTSSNDDSKSNLNASGKTTTSTDGPKFPGDKSSTTQNNNQQKKGIQVLPDGRVTNIPPGM
VTDQFGMIGLLTFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASSPCRP
QDIDFHVPSEYLTNIHIRDKLAAIKLGRYGEDLLFYLYYMNGGDVLQLLAAVELFNRDWR
YHKEERVWITRAPGMEPTMKTNTYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHLPST
FNYNPAQQAF
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgcgtactgtgaggaaaggacacgactctatggtgaggactgatggacatacattatct
gaaaaaagaaactatcaggtgacaaacagcatgtttggtgcttcaagaaagaagtttgta
gagggggtcgacagtgactaccatgatgaaaatatgtactacagccagtcttctgtgttt
ccacaccggtcagaaaaagatatgctggcatcaccatctacatcaggtcagctgtctcag
tttggggcaagcttatacgggcaacaaagtgcactaggccttccaatgagggggatgagc
aacaatacccctcagttaaatcgcagcttatcccaaggcactcagttaccgagccacgtc
acgccaacaacaggggtaccaacaatgtcacttcacacgcctccatctccaagcaggggt
attttgcctatgaatcctaggaatatgatgaaccactcccaggttggtcagggcattgga
attcctagcaggacaaatagcatgagcagttcagggttaggtagccccaacagaagctcg
ccaagcataatatgtatgccaaagcagcaaccttctcgacagccttttactgtgaacagt
atgtctggatttggaatgaacaggaatcaggcatttggaatgaataactccttatcaagt
aacatttttaatggaacagacggaagtgagaatgtgacaggattggacctttcagatttc
ccagcattagcagaccgaaacagaagggaaggaagtggtaacccaactccattaataaac
cccttggctggaagagctccctatgttggcatggtaacgaaaccagcaaatgaacaatcc
caggacttctcaatacacaatgaagattttccagcattacctggttccagctataaagat
ccaacatcaagtaacgatgacagtaaatctaatttgaatgcgtctggcaagacaactacg
agtacagatggacccaaattccctggagacaaaagttccacaacacaaaataataatcag
cagaaaaaagggatccaggtgttacctgatggtcgggttactaacattcctccagggatg
gtgacggaccaatttggaatgattggcctgttaacattcatcagggcagcagagacagac
ccaggaatggtacaccttgcattaggaagtgatttaaccacattaggcctcaatctgaac
tctcctgaaaatctctaccccaaatttgcgtcaccctgggcatcttcaccttgtcgacct
caagacatagacttccatgttccatctgagtacttaacgaacattcacattagggataag
ctggctgcaataaaacttggccgatatggagaagaccttctcttctatctttattacatg
aatggaggggatgtattacaacttttagctgcagtggagctttttaaccgtgattggaga
tatcacaaagaagagcgagtatggattaccagggcacccggcatggagccgacgatgaaa
accaatacatacgagaggggaacatattacttctttgactgtcttaactggaggaaagta
gctaaggagttccatctggaatatgacaaattagaagagcggcctcacctgccatccacc
ttcaactacaaccctgctcagcaagccttctaa
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