Ochotona curzoniae (black-lipped pika): 121157924
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Entry
121157924 CDS
T11174
Name
(RefSeq) ATP-dependent RNA helicase DDX19B isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03013
Nucleocytoplasmic transport
ocz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121157924
03015 mRNA surveillance pathway
121157924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocz03019
]
121157924
Enzymes [BR:
ocz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121157924
Messenger RNA biogenesis [BR:
ocz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
121157924
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
121157924
NCBI-ProteinID:
XP_040838317
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MSSPSAGPGPELGSLRRPGVHGRVAPVSESTRSRVPPAPETMATDSWALAVDEQEAAAES
LSNLHLKDEKIKPDANGAVVRATANTENPDEEEKEDRAAQSLLNKLIRSNLVDNTNQVEV
LQRDPSSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPLMLAEPPQNLIAQSQ
SGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGRFYPELKLAYAVR
GNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIR
IQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSNRDE
KFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMVVEQRAAVIERF
REGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLA
VNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIEKIAN
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgagttccccctcggcgggaccggggcctgagctcggttcgctgcgacgccccggagtc
cacggacgcgtcgcccctgtaagcgaatccactagatcgagggtcccacctgcgcccgag
accatggccaccgactcgtgggccctggcggtggatgagcaggaagcggcggctgaatcg
ttgagcaacttgcatcttaaggacgagaaaatcaaaccagatgccaatggtgctgttgtc
agagctactgcaaatacagagaacccagatgaagaagagaaagaggacagagctgcccag
tccttgctcaacaagctgatcagaagcaacctcgtggataacacaaaccaagtggaagtc
ctgcagcgggaccccagctccccactgtactcagtgaagtcctttgaggagctccggctg
aagccacagctgctgcagggagtctacgccatgggcttcaaccgtccatccaagatccag
gagaatgctttgcctttgatgcttgctgaacccccacagaatttaattgcccagtctcaa
tccggaactggtaaaacagctgcctttgtactggccatgctcagccaagtagaacctgca
aacaaatacccacagtgtctctgcctctccccaacatatgaacttgcacttcaaacgggg
aaagtgatcgagcagatgggcagattttaccctgagctgaagctagcctatgctgttcgt
ggcaataaattggaaagagggcagaagatcagtgagcagattgtcattggcaccccaggg
actgtcctggactggtgctccaaactcaagttcattgaccccaagaagatcaaggtgttt
gttctggatgaggctgacgtgatgatagccactcagggccaccaggatcagagcatccgc
atccagaggatgctgcccagaaactgccagatgctccttttctctgccacctttgaagac
tcggtgtggaagtttgcccagaaggtggtcccggaccccaatgtgatcaaactgaagcgc
gaggaggagacactggacaccatcaagcagtactacgtcctgtgcagcaacagagatgag
aagttccaggccttgtgcaacctgtacggggccatcaccattgctcaggccatgatcttc
tgccacacccgcaaaacagccagctggctggcagcagagctctcaaaagaaggccaccag
gtggccctgctgagtggtgaaatggtggtggaacagagggcagctgtgattgagcgcttc
cgagaaggcaaagagaaggttctggtgaccaccaatgtgtgtgcccgtggcatcgatgtt
gagcaggtgtctgtcgtcatcaactttgatcttcccgtggacaaggatgggaacccggac
aacgagacctacttgcaccggatcgggcgcacgggccgctttggcaagaggggcctggcc
gtgaacatggttgatagcaagcacagcatgaacatcctgaaccgaatccaggagcatttc
aataagaagatagaaagattggacacagatgatttggacgagatagagaaaatagccaac
tga
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