Ochotona curzoniae (black-lipped pika): 121157925
Help
Entry
121157925 CDS
T11174
Name
(RefSeq) ATP-dependent RNA helicase DDX19A isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03013
Nucleocytoplasmic transport
ocz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121157925
03015 mRNA surveillance pathway
121157925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocz03019
]
121157925
Enzymes [BR:
ocz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121157925
Messenger RNA biogenesis [BR:
ocz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
121157925
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
121157925
NCBI-ProteinID:
XP_040838320
LinkDB
All DBs
Position
Unknown
AA seq
478 aa
AA seq
DB search
MATDSWALAVDEQEAAVKSISNLQIKEEKVKPESNGVIKTSNPAEKTDEEEKEDKAAQSL
LNKLIRSNLVDNTNQVEVLQRDPSSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQEN
ALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPGDRHPQCLCLSPTYELALQTGKV
IEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVL
DEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREE
ETLDTIKQYYVLCSNRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVA
LLSGEMVVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNE
TYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIEKIAN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgattcctgggccctggcggtggacgagcaggaagcggctgtcaagtcgata
agcaatttgcagatcaaggaagagaaagtcaaaccagaatccaatggtgttatcaaaacc
agcaacccagcagagaaaacagatgaagaagagaaagaggacaaagctgcccagtccttg
ctcaacaagctgatcagaagcaacctcgtggataacacaaaccaagtggaagtcctgcag
cgggaccccagctccccgctgtactcagtgaagtcctttgaggagctccggctgaaacca
caacttctccaaggagtctatgctatgggtttcaatcgaccatccaagatccaagagaac
gcattacctatgatgcttgctgaacccccacagaatctaattgcccagtctcagtctggc
actggaaagactgcagcttttgtgctggccatgctcagtcgagtggaaccaggagacaga
cacccccagtgtctctgcctctccccaacatatgaactggcacttcaaactggaaaagtg
atcgagcagatgggcaaattttatccagaactaaagcttgcttatgctgttcgtggcaat
aaattggaaagagggcagaagatcagtgagcagattgtcattggcaccccagggactgtc
ctggactggtgctccaaactcaagttcattgaccccaagaagatcaaggtgtttgttctg
gatgaggctgacgtgatgatagccactcagggccaccaggatcagagcatccgcatccag
aggatgctgcccaggaactgccagatgctccttttctctgccacctttgaagactcggtg
tggaagtttgcccagaaggtggtcccggaccccaatgtgatcaaactgaagcgcgaggag
gagacactggacaccatcaagcagtactacgtcctgtgcagcaacagagatgagaagttc
caggccttgtgcaacctgtacggggccatcaccatcgctcaggccatgatcttctgccac
acccgcaaaacagccagctggctggcagcagagctctcaaaagaaggccaccaggtggcc
ctgctgagtggtgaaatggtggtggagcagagggcagctgtgattgagcgcttccgagaa
ggcaaagagaaggttctggtgaccaccaatgtgtgtgcccgtggcatcgacgttgagcag
gtgtctgtcgtcatcaactttgatcttcccgtggacaaggatgggaacccggacaacgag
acctacctacaccggatcgggcgcacgggccgctttggcaagaggggcctggccgtgaac
atggttgatagcaagcacagcatgaacatcctgaaccgaatccaggagcatttcaataag
aagatagaaagattggacacagatgatttggatgagatagagaaaatagccaactga
DBGET
integrated database retrieval system
