Ochotona curzoniae (black-lipped pika): 121157940
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Entry
121157940 CDS
T11174
Symbol
ATXN1L
Name
(RefSeq) ataxin-1-like
KO
K23616
ataxin 1/1L
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04330
Notch signaling pathway
ocz05017
Spinocerebellar ataxia
ocz05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121157940 (ATXN1L)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
121157940 (ATXN1L)
05022 Pathways of neurodegeneration - multiple diseases
121157940 (ATXN1L)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AXH
ATXN-1_C
Motif
Other DBs
NCBI-GeneID:
121157940
NCBI-ProteinID:
XP_040838349
LinkDB
All DBs
Position
Unknown
AA seq
690 aa
AA seq
DB search
MKPVHERSQECLPPKKRDLPVTSEDMGRTTSCSTNHTPSSDASEWSRGVVVAAGQSQAGT
RVSLGSDGAEAITGLTVDQYGMLYKVAVPPATFSPTGLPSVVNMSPLPPTFNVASSLIQH
PGIHYPPIHYAQLPSTSLQFIGSPYSLPYAVPPSFLPSPLLSPSANLTTSHLPHFVPYAP
LLAEEAAPSPQASSPAHSFNKTPSATSPSGQLPHHASTQPLDLAPGRMPIYYQMSRLPAG
YTLHETPTAGASPVPVLTPQEGQPALETASANGGQRRERNLLRRESEALESPSSKGEGQG
LVPVVECVVDGQLFSGSQTPRVEVVAPAHRGTPDTDLEVQRVVGALASQDYRMVAAQRKD
EPSPLNLSHHTPDQQGEGRGLAKNPAELTEKNQARGLYPQSHQEAVKHRPLPKAMVVANG
NLVPTGTDPGLLPVGSEILVASSLDMQGRATFPDKEPTPPPVTSSHLPSHFMKGAIIQLA
TGELKRVEDLQTQDFVRSAEVSGGLKIDSSTVVDIQESQWPGFVMLHFVVGEQQSKVSIE
VPPEHPFFVYGQGWSSCSPGRTAQLFSLPCHRLQVGDVCISTSLQSLNSNSVSQASCASS
GQLGPRERPERTVLGPRELCDSEGKSQPAGEGSRVVESSQAEPGAQACWPAPSFQRYSMQ
GEEARAALLRPSFIPQEVKLSIEGRSNAGK
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctgttcatgagaggagtcaggaatgccttccaccaaagaaacgagacctcccc
gtgaccagcgaggatatggggagaactaccagctgctccactaatcacacaccctccagc
gatgcctctgagtggtcccgaggggttgtggtggcggccgggcagagccaggcaggaacc
agagtcagcctgggaagtgatggagctgaggccattactggtctgacggtggaccagtat
ggcatgctgtataaggtggctgtgccacctgccacattctcaccgactggcctcccatcc
gtggtaaacatgagccctttgccccccacgtttaatgtagcgtcttcactgatccagcat
cccggaatccactaccccccgattcactatgctcagctcccatccacctcactgcagttt
atcgggtctccttacagccttccctatgctgtgccaccaagtttcctaccgagtcctctc
ctttctccttctgccaacctcaccacctctcatctcccacactttgtgccatatgccccc
ctcctggcagaggaggccgctccctcgccccaggcgtcatcccccgcccactcatttaac
aaaaccccttctgccacctccccatctgggcagttgccacatcatgcgagtacgcaacca
ctggacctcgctccaggccggatgcccatttattatcagatgtccaggttgcctgctggg
tataccttgcatgaaacccctacagcaggtgccagcccagttccagttcttacccctcag
gagggccagcccgctctggaaacagcttctgccaatggaggacagaggcgagaacgaaat
ttgttaagacgagaaagtgaagccctcgagtcccccagcagcaagggtgaaggccaagga
ctggtgccagtggtggagtgtgtggtggacggacagttgttttcaggttctcagactcca
cgggtggaggtggtggcgccggcacatcgaggaaccccagacacggatcttgaggtgcag
cgggtagttggcgctttagcttctcaggattatcgcatggtggcagctcagaggaaggat
gaacctagcccccttaacctgtcccatcatacccctgaccagcagggtgaggggcgaggg
ttagccaagaaccctgcagagctgacagagaaaaatcaggcccgtgggctctatcctcaa
tcccatcaagaagcggtgaaacatagacctttacccaaagcaatggttgtagctaatggc
aacctggtgcccactggaactgacccaggcctgctgcctgtgggctcggagatcctggtg
gcatcaagtctggacatgcagggcagagccaccttcccagacaaggagccaacgccaccc
cccgttacctcctcccacttgccctcccatttcatgaaaggcgccatcatccagctggct
acaggggagctgaagcgggtggaggacctccagacccaggattttgtgcgcagtgccgaa
gtgagtggggggctgaagattgactccagcacggttgtggacattcaggagagccagtgg
cctggatttgtcatgctgcatttcgtggtcggtgagcagcagagcaaagtgagcatcgag
gtgcctcctgagcaccccttctttgtatatggccagggttggtcctcctgcagccctggg
cggactgcacagctcttctctctgccctgtcaccggctacaggtgggggatgtctgcatc
tctaccagtttacagagcttgaacagtaactccgtttctcaggccagctgcgcttcgtca
ggccagctggggccccgagaaaggcctgagaggacagtcttgggacccagagagctatgt
gacagtgaggggaagagccaaccagcaggagagggctcccgtgtggtagagtcctcccag
gctgagcctggtgctcaggcctgctggccagctccaagcttccaaagatacagcatgcaa
ggggaggaggcacgggctgcgctgctccgtccctctttcattccacaggaggtaaagctg
tccatcgaagggcgttccaatgcgggaaaatga
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