Ochotona curzoniae (black-lipped pika): 121158114
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Entry
121158114 CDS
T11174
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121158114 (VPS35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocz04131
]
121158114 (VPS35)
Membrane trafficking [BR:
ocz04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
121158114 (VPS35)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
121158114
NCBI-ProteinID:
XP_040838701
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDIGDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLTGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDSIMNLVSTLIQDQPDQPIEDPD
PEDFADEQGLVGRFIHLLRSEDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
FRYKENSTVDDKWEKKCQKIFSFAHQTVSALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLR
RESPESEGPIYEGLIL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcctacgacacagcagtcacctcaggatgagcaggaaaagctcttggatgaagccata
caggctgtgaaagtccagtcatttcaaatgaagagatgtctggataaaaacaagctcatg
gatgctctgaagcatgcttctaatatgcttggtgaactgaggacatctatgttatcgcca
aagagctattatgaactttatatggctatttctgatgaattgcactacttggaggtctac
ctgacagatgagtttgctaaaggaagaaaagtagcagatctgtatgaacttgtacagtat
gctggaaacatcatcccaaggctttacctattgattacagttggagttgtatatgtcaag
tcatttcctcaatccaggaaagacattttgaaagatttggtagaaatgtgccgtggcgtg
cagcatcccttgaggggtctgtttcttcgaaattatcttctccagtgtactagaaacatc
ttacctgatgagggagaaccaacagatgaagaaacaactggagatatcggtgattccatg
gactttgtactactcaactttgcagaaatgaacaagttgtgggtgcgaatgcaacatcag
ggtcatagccgcgatagagaaaaaagagagcgagaaagacaggaactgagaattttagtg
gggacaaatttggtgcgcctcagccagctggaaggtgtaaatgtggaacgttataaacag
attgttttgactggcatcttggagcaagttgtgaattgcagagatgctttggctcaagaa
tatctcatggaatgcatcatccaggtttttcctgatgaattccacctccaaactttgaat
ccttttctccgggcctgcgctgagttacaccagaatgtaaatgtgaaaaacataatcatt
gctttaattgatagattagctttatttgcccaccgtgaagatggacctggaatcccagca
gatattaaactttttgatatattttcacagcaggtggctacagtgattcagtctagacaa
gacatgccatccgaggatgttgtatctttacaagtctctctcattaatcttgctatgaaa
tgttaccccgatcgagtggactatgttgataaagttttagagacgacggtggagatattc
aataagctcaacctggaacatattgctaccagtagtgcagtttcaaaggagctcaccaga
cttttgaagatacctgttgatacttacaacaatatcttaacagtcttgaaattaaaacat
tttcacccgctgtttgagtactttgattatgagtccagaaagagcatgagttgttatgtg
cttagtaatgtgctggattataacacagaaattgtctctcaagaccaggtggattccata
atgaatttggtatccacattgattcaagatcagccagatcaacccattgaagatcctgat
ccggaagactttgctgatgagcagggccttgtgggccgattcatccatcttctgcgatcc
gaggaccccgatcagcagtacttgattttaaacacagctcgaaaacattttggagctggt
gggaatcagcggattcgcttcacactgccacctctggtgtttgcagcttaccagctagct
tttcgatacaaagaaaattctacagtggatgataagtgggagaagaaatgccagaagatt
ttttcatttgctcaccagactgtcagtgctttgattaaagcagaactggcagaattaccg
ttaagactttttctgcaaggggcactagctgctggagaaattggttttgaaaatcatgag
acagtagcatatgagttcatgtcccaggcgttttctctgtatgaggatgaaatcagtgat
tccaaagcacagctggctgccatcaccttgatcattggcactttcgagaggatgaagtgc
ttcagtgaagagaatcacgaaccgttgaggactcagtgtgcacttgctgcgtccaaactc
ctgaagaaacccgaccagggccgagctgtgagcacctgtgcacacctcttctggtctggt
cgaaacacagacaaaaatggggaggagcttcatggaggcaagagggtaatggagtgccta
aagaaagctctaaaaatagccaatcagtgcatggacccctctcttcaagtgcagcttttt
atagaaattctaaacagatatatctatttttatgaaaaggaaaatgatgcggtaacaatt
caggttttgaaccagcttatccaaaagattcgagaagatctcccaaatctcgagtccagc
gaagaaacagagcagattaacaaacattttcataacacgctggagcatttgcgcttgagg
cgggaatcaccagaatccgaggggccaatttatgaagggctcatcctgtga
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