KEGG   Ochotona curzoniae (black-lipped pika): 121158157
Entry
121158157         CDS       T11174                                 
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain
  KO
K06237  collagen type IV alpha
Organism
ocz  Ochotona curzoniae (black-lipped pika)
Pathway
ocz04151  PI3K-Akt signaling pathway
ocz04382  Cornified envelope formation
ocz04510  Focal adhesion
ocz04512  ECM-receptor interaction
ocz04518  Integrin signaling
ocz04820  Cytoskeleton in muscle cells
ocz04926  Relaxin signaling pathway
ocz04933  AGE-RAGE signaling pathway in diabetic complications
ocz04974  Protein digestion and absorption
ocz05146  Amoebiasis
ocz05165  Human papillomavirus infection
ocz05200  Pathways in cancer
ocz05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:ocz00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    121158157 (COL4A4)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    121158157 (COL4A4)
   04518 Integrin signaling
    121158157 (COL4A4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121158157 (COL4A4)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    121158157 (COL4A4)
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    121158157 (COL4A4)
  09154 Digestive system
   04974 Protein digestion and absorption
    121158157 (COL4A4)
  09158 Development and regeneration
   04382 Cornified envelope formation
    121158157 (COL4A4)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    121158157 (COL4A4)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    121158157 (COL4A4)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    121158157 (COL4A4)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    121158157 (COL4A4)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    121158157 (COL4A4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ocz04147]
    121158157 (COL4A4)
   00536 Glycosaminoglycan binding proteins [BR:ocz00536]
    121158157 (COL4A4)
Exosome [BR:ocz04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   121158157 (COL4A4)
Glycosaminoglycan binding proteins [BR:ocz00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   121158157 (COL4A4)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 121158157
NCBI-ProteinID: XP_040838709
LinkDB
Position
Unknown
AA seq 1682 aa
MSFTIIWLHIQMSPWSLVLIFFSIQHAYGSGKKYAGPCGGRDCSVCQCFPEKGSRGQPGP
LGPQGPIGPLGPPGPPGIPGEKGMRGDSGPPGAAGDTGDKGPTGVPGFPGLDGIPGHPGP
PGPRGKPGMDGYNGSRGEPGLPGERGVPGSRGLPGLSGEKGEKGNSVFISGGVKGIQGDR
GEPGPPGLPGSRGARGPSGPMGYSGAPGLPGPPGRPGSPGLKGNPGVGVKGLKGEPGEVG
LQGSPGPTLLVEPPDFDLYKGEKGLKGIPGMIGLPGPPGPKGEPGVGAKGEKGIPGFPGP
RGDPGSYGPPGFPGLKGEPGLVGEPGLLGFLGPKGDPGDRGQPGPPGALVTPSLPVKGPP
GDPGFPGRYGEMGATGPPGPPGPPGRPGESNAGMKGPPGPPGSPGLPGLPGAPGVPGRPD
SAPGRPGLPGSPGPPGAPGPQGPPGSDVIYCTAGCPGPQGIKGRMGPPGGRGLKGEKGNK
GLCDCKPGPMGPPGPPGFPGRQGSKGDLGPPGWLGEKGDPGPPGAAGSPGPPGQPGAAGP
PGSKGAKGNMVVPRVKGHKGERGPDGPPGFPGQDGPHGWDGLGGERGAPGLPGDHEDAVP
GDKGFPGPPGPLGKAGAMGPPGTGFPGPPGQRGQPGVSGHPGLRGPVGLKGQKGDTILCN
ITYPGMPGLPGFAGPPGLKGFPGPPGAPGPRCLDGRKGQRGQPGRSGMPGPPGFRGDMGD
PGFGGEKGSSPDGLPGPPGLPGMNGQRGIPGDPAFGPPGPPGNRGLPGEPGTKGSRGDVG
CPGAEGVAGPPGLPGLKGPKGREGGAGFPGVPGPPGHSCDKGAAGTPGPPGLPGAPGSPG
IPGWKGPRGDMGPPGPAGMKGLPGFPGRPGVDGPPGPPGIPGLLGEDGLPGFPGLKGPQG
LPGFRGFPGERGRPGPEGEPGRKGEIGEQGWPGPLGDQGARGAKGERGPPGDEGEMAVIS
KKGKTGDPGAPGDGGLPGERGDKGSSGMPGRRGEPGRLGPPGFHRGEPGRNGQPGLPGPP
GPPGSPGMTGIIGFPGFPGDQGEPGSAGPPGFSGLDGTRGPKGSKGDPASLFGSPGPKGE
PGSPGYQGHSGVPGEQGLPGVQGHRGPAGRPGSPGILGSSGYPGGQGIPGRQGLPGEMGD
PGPRGLVGNPGIPGPPGMKGPTGSPGLDGLHGLKGQKGTKGASGLHEMGPPGPVGTPGLK
GERGDPGSPGSSPPGPSGERGPPGLPGRPGPPGPVGAKGRALMGDIPDPGPPGDQGFSGP
DGPRGEPGPPGPPGSVDLLKGEPGECGMPGPPGDPGPPGPPGCIGHPGCDGQDGQKGPIG
FPGMQGPSGPQGLPGEKGLPGPPGRRGFRGPPGPRGEPGPPADLEACPRIPGLPGVPGPR
GPEGPRGFPGERGSPGPGCKGEPGLDGRRGRDGIPGPPGPPGSKGDPGEAGYPGVPGPPG
PTGDPGPKGLGPGYLSGFLLVLHSQTDQEPACPMGMPRLWTGYSLLYLEGQEKAHNQDLG
LAGSCLPIFSTLPFAYCNIHQVCHYAQRNDRSYWLASAAPLPMMPVAEEEIRPYISRCAV
CEAPAQAVAVHSQDQSIPPCPQAWRSLWIGYSFLMHTGAGDQGGGQALMSPGSCLEDFRA
APFLECQGRQGTCHFFANKYSFWLTTVQPDLQFFSAPSPDTLKDGQAQRQKISRCQVCVK
YS
NT seq 5049 nt   +upstreamnt  +downstreamnt
atgtctttcaccatcatctggcttcatattcagatgtccccatggtcactggtacttatc
ttcttttctatccaacatgcatatgggagtggaaagaaatatgctggtccgtgtggcgga
agagattgctctgtgtgccagtgctttcctgagaaggggtctcggggtcagccaggacca
ctgggaccacagggtccaatagggccgctgggccccccaggaccccccgggattccagga
gaaaaaggaatgagaggtgacagtggccctcctggagcagcaggcgacacaggagataag
ggtccaactggtgttcctggatttccaggtttggatggcatacctgggcacccggggcct
cctggacccagaggcaaacctggcatggatggctacaacggctctagaggtgaaccaggt
ttgccaggagaacgaggagttcctggctcaagaggcctgccaggcctttctggggaaaag
ggagaaaaaggaaattcagtgttcatttcaggtggtgttaaaggcattcagggcgaccga
ggggaaccaggaccacctggcttaccaggatcaaggggtgctagaggaccttcaggtccc
atgggatattctggagctccagggttgccgggacctcctggccgccctgggagcccaggt
ttgaagggcaatcctggtgtgggagtgaagggtctaaagggagagccgggtgaggttggc
ctgcaaggttctcctggacccaccctcttggtggagccacctgactttgatctgtataaa
ggagaaaagggtttgaaaggaattcctggaatgattggactgcctggacctccaggaccc
aagggtgaacctggtgtaggcgcaaaaggagagaaaggtattcccggattcccaggacct
cggggggacccaggttcctacggacctccaggcttcccaggactgaagggagaaccaggg
cttgttggagagcccggactgctcggatttcttggccctaagggagatcccggagaccgc
gggcagcccggaccaccaggtgctttggtcactccatctcttccagtcaaaggtcctcca
ggggatccaggcttccctggtcgctatggagaaatgggggccactggaccacccggtccc
ccaggtccaccaggcaggcctggggaatccaatgcaggcatgaagggacctcctggccca
cctgggtctcctggtctgccaggacttccaggggcacctggtgttcctgggagacctgac
tcagctccagggagaccagggctgccaggatcacccggccctcctggagcaccaggaccg
cagggacccccaggatcagatgtgatatactgtactgctgggtgccctggacctcaagga
ataaagggaagaatgggtcctccaggaggaagaggcttgaaaggagaaaaaggaaacaaa
ggactctgtgactgcaagcctggtcccatgggtcccccaggaccaccaggatttcctggg
agacagggcagcaagggggacttgggaccccctggttggcttggtgaaaaaggagaccca
ggccctcctggtgctgcaggatctccagggcctccaggacagccgggtgccgctggacca
cctggcagcaaaggagcaaagggcaacatggttgtaccaagggttaaagggcacaaagga
gaaagaggacctgatgggccaccaggatttccagggcaagatggaccacatggttgggat
ggacttggtggagagaggggagctccaggactcccaggagatcacgaagatgcagtccca
ggagataaagggtttcctggaccaccaggccccctggggaaagcaggtgctatgggacct
cctggcacaggatttcctggcccaccaggacagagaggtcaaccaggagtttcaggccac
ccgggtttgaggggtcctgttggcttgaagggtcagaaaggtgacacaattctttgtaac
ataacctaccctggtatgccaggccttccaggatttgctggacctccaggtctaaaggga
ttcccagggcccccgggtgctccaggtccaaggtgcttggatgggcggaaaggccaacgt
ggccagccgggaagatcgggaatgccaggtccccctggtttccgaggggacatgggagat
ccaggttttggaggtgaaaaaggatcctctcccgatgggctcccaggtcctccaggtcta
cccggaatgaatggccagagaggaatcccaggagaccccgcatttggccccccgggcccc
ccagggaacaggggtcttccgggagaaccggggaccaaaggatctagaggagatgtggga
tgccctggagctgaaggggttgctggccctcccggattgccagggctcaagggtcccaag
ggcagagaaggtggtgctgggtttccaggggtcccaggcccacctggccattcctgtgac
aaaggcgctgcagggactccagggcctccagggctccccggtgctccaggaagcccaggc
atcccaggttggaaagggccacgaggagatatggggcctcctggaccagctggaatgaag
ggcctccccgggtttccaggccggccaggggtcgatggacccccagggcctccaggaatc
ccaggccttttgggggaagatggattacctggctttccaggcctgaaaggaccccaaggg
ctgcctggtttcagaggtttccctggagagagaggaaggccaggaccagagggagagcca
ggcaggaagggagaaattggagagcagggttggcctggtcctctgggagaccagggagca
agaggtgctaaaggagagagaggacctcctggagatgaaggagagatggctgtcatttcc
aagaagggcaaaaccggggaccctggagcgcctggagatggtggattgccaggagaaaga
ggtgataaaggaagttccgggatgccagggagaagaggagagccgggaagactcggacca
cctggattccacaggggtgagcctggcagaaatggacaaccagggttacccgggcctcct
gggcctccaggctcacccggaatgacaggaatcattggttttccaggatttccaggtgac
cagggtgagccaggttctgcaggccctcctggattttcaggacttgacggcacaagagga
cctaaaggaagcaaaggcgatcctgccagtctgtttggttcacctggtccaaagggagag
ccaggtagccctgggtatcaaggacattctggagttccaggagagcagggtttgcctggt
gttcaaggacacagaggaccagctggaaggccaggatcacctggcattttgggatcatct
gggtatccaggtggccagggaatacctgggcggcagggacttccaggagaaatgggggac
cctggaccaagaggcctcgtgggcaacccagggataccaggacctccaggaatgaaaggt
cccactgggtctcctggcttggatggcctgcatgggctgaagggacagaaaggaaccaaa
ggtgcttcaggcttgcatgaaatgggtccacctggtccagtgggaacacctggactcaaa
ggggagcgtggagaccctggcagcccagggagttctcctccaggcccttctggtgaaaga
ggtcctccaggcctcccagggagaccaggaccacctggtcctgtgggtgccaaaggaaga
gctcttatgggtgacattcccgacccaggtcctcctggagatcagggattttctggccct
gatggcccaagaggagaacccgggcctccaggacccccgggaagcgtggatcttctgaaa
ggagagccaggagagtgtggtatgccagggccaccaggtgacccaggcccaccaggccct
ccgggatgcataggccatccaggatgtgatggacaagatggccagaaaggacccatcggg
tttccagggatgcaagggccctctggtccccaagggctacctggagagaaaggtttacct
ggacctccaggtagaagaggattcagagggcctccaggtcccagaggcgaacctgggcca
cctgctgatctggaagcctgccccagaattccagggcttcctggtgtgcctggcccaaga
ggaccagaaggacccaggggattccctggagaaagaggatcccccggaccagggtgcaaa
ggagaacctggactggatggcagaaggggcagagatggtatccctgggcctcctgggcct
cctggaagcaaaggtgaccctggagaagctggctaccctggagtaccaggacctcctggt
cccactggggaccctggacccaaagggttaggcccaggttatctcagtggcttcctcctg
gtcctccacagtcagacagaccaagaacccgcctgccccatgggcatgcccaggctctgg
actgggtatagcctattgtacctggaaggacaagagaaggctcacaatcaagaccttggt
ctggcagggtcctgccttcccatctttagcacgctgccctttgcctactgcaacatccac
caagtgtgccactatgcccagagaaatgacagatcctactggctggccagtgctgcaccc
ttgcccatgatgccggtcgcggaggaggagattcgtccctacatcagccgctgtgctgtg
tgcgaggccccagcacaggcggtagcagtgcacagccaggaccaatccatccctccatgc
ccacaagcctggaggagtctctggattgggtactccttcctgatgcacacaggagctggg
gaccaaggaggggggcaggccctcatgtcacctggaagctgcttggaagacttcagagct
gcgccattccttgaatgccaaggccggcagggcacatgccacttctttgcaaataagtac
agcttctggctgacaacagtgcaaccggacttgcaatttttctctgccccttcaccagac
accttaaaagatggccaggcccaacgccagaaaatcagcaggtgccaagtctgtgtgaag
tacagctaa

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