KEGG   Ochotona curzoniae (black-lipped pika): 121158158
Entry
121158158         CDS       T11174                                 
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
  KO
K06237  collagen type IV alpha
Organism
ocz  Ochotona curzoniae (black-lipped pika)
Pathway
ocz04151  PI3K-Akt signaling pathway
ocz04382  Cornified envelope formation
ocz04510  Focal adhesion
ocz04512  ECM-receptor interaction
ocz04518  Integrin signaling
ocz04820  Cytoskeleton in muscle cells
ocz04926  Relaxin signaling pathway
ocz04933  AGE-RAGE signaling pathway in diabetic complications
ocz04974  Protein digestion and absorption
ocz05146  Amoebiasis
ocz05165  Human papillomavirus infection
ocz05200  Pathways in cancer
ocz05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:ocz00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    121158158 (COL4A3)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    121158158 (COL4A3)
   04518 Integrin signaling
    121158158 (COL4A3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121158158 (COL4A3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    121158158 (COL4A3)
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    121158158 (COL4A3)
  09154 Digestive system
   04974 Protein digestion and absorption
    121158158 (COL4A3)
  09158 Development and regeneration
   04382 Cornified envelope formation
    121158158 (COL4A3)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    121158158 (COL4A3)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    121158158 (COL4A3)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    121158158 (COL4A3)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    121158158 (COL4A3)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    121158158 (COL4A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ocz04147]
    121158158 (COL4A3)
   00536 Glycosaminoglycan binding proteins [BR:ocz00536]
    121158158 (COL4A3)
Exosome [BR:ocz04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   121158158 (COL4A3)
Glycosaminoglycan binding proteins [BR:ocz00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   121158158 (COL4A3)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 121158158
NCBI-ProteinID: XP_040838710
LinkDB
Position
Unknown
AA seq 1685 aa
MSSGTVPWSLALLLRLLLLLLLVATPAVAKDGTTDLLSCFPTKRFLFSSQSQCVCGGTKG
DKGEKGFPGPPGSPGQKGFPGPEGLPGPPGPKGAPGLPGLTGPKGVRGVTGLPGFSGSPG
LPGIPGNAGPYGLAGVPGCNGSKGEQGFPGFPGTPGYPGPPGAAGLKGQKGDPAEGEDIE
LNGKGDPGLPGLPGFQGFPGPAGFPGPVGLPGHPGFLGFPGAMGPAGPKGHMGDNVIGQK
GDQGVKGLTGPPGPPGTVIVTLTGVDNRTDLKGEKGDKGAVGAAGLPGPSGPPGESTRSE
KGAPGEPGSQGKPGKDGAPGFPGTEGPKGNRGLPGLIGEAGIKGWKGDIGPPGFRGPTEY
YDAYQQKGDEGIPGPPGPKGARGPQGLTGPPGAPGIAGPSRPGLRGAPGWPGLQGSKGEP
GPPGKDALGPPGVPGCPGSPGPAGAPGPPGPPGDIIFRMGPPGDRGLPGRLGFPGIPGTD
GPKGEPGFLCTECMYTPGAPGLPGLPGLDGVKGIPGGQGAAGLKGSPGSPGRTGPPGFPG
FPGARGDPGHEGGKGETPEPQGQAGAPGDPGLRGPPGRKGLAGIPGTPGLKGLPGPRGDP
ALSGEKGDQGPPGDPGFPGPPGPAGPAGPPGYGLQGEPGPKGSQGVPGAPGPPGEAGPKG
EPSVSTPVPGPPGPPGLPGRAGSQGPPGLPGLKGKCAEPGLPGPDGEPGIPGIGFPGPPG
PKGNQGFPGTKGSPGCPGEMGKPGIPGKPGPPGSKGEPALAMPGDPGRPGFPGERGYSGE
RGDIGLPGPPGVPGIPGKEGFDGPRGDPGQPGPPGEPGLPGRCIEGPRGAPGLPGLNGLQ
GQPGRRGETGPKGDPGIPGLDRTGFPGEPGPPGMPGHGGEVGPPGHKGYPGAPGVSGPPG
EKGMMGMMGYPGTPGPPGPPGNPGPPGHRGSHGIPGVKGQRGLTGAKGEPGAKGNPGPSQ
ISHLTGDKGEPGLKGSPGNPGEKGSKGVPGLPGLKGPDGPPGPPGPPGPRGDMGIIGSPG
EAGPRGEPGGTGTMGMPGSKGEQGALGPPGLAGRPGLPGISGLPGDKGEPGYAEGARPGP
PGPKGDPGPPGDLGKKGERGPPGPPGHLGPAGAAGAPGSPGGAGPPGNPGPDGDMGLKGI
KGFPGHPGVKGPPGLPGFPGSPGPVGMRGNQGRDGIPGPPGEKGETGLLGVHPGPRGQPG
VQGAKGYRGAPGLPGRPGRKGSMGDAGPRGPTGAAGLPGPPGPPGAIKPGQKGNRGPPGS
RGKPGEPGPPGPPGSPVAGIKGDKGFMGHPGPKGPPGTIGEMGPPGHPGAPGAPGLPGLR
GDPGFSGFPGMRGEKGNPGFPGPPGPPGPSGPKGPPGVRGAPGTLQIISLPGSPGPPGPR
GEPGMQGEPGPPGSPGSPGPCGPKGRPGMDGKPGIPGPAGEKGSKGFQGEQGPRGSEGLP
GVKGKAGDAGPPAPGTTMRGFVFTRHSQTTAVPACPEGTEPLYSGYSLLFVQGNERAHGQ
DLGTLGSCLQRFTTMPFLFCDINEVCNFASRNDYSYWLSTPAPMPMDMTPITGRALEPYI
SRCTVCEGPAIAIAVHSQTTDVPPCPQGWISLWKGFSFIMFTSAGSEGAGQALASPGSCL
EEFRANPFIECHGRGTCNYYSNSYSFWLASLNPERMFRKPIPSTVKAGELEKIISRCQVC
MKKRH
NT seq 5058 nt   +upstreamnt  +downstreamnt
atgagctccgggacagtgccctggtcgctggcgcttctgctacggctcctgctgctgctg
cttctggttgctacgcccgcggtagccaaggatggcaccacggacttactgagctgcttc
ccaacaaagcgctttctcttctcttcccagagccagtgtgtgtgcggtggaaccaaaggg
gacaagggagaaaaaggatttcctggaccccctggttctcctggccagaaaggatttcca
ggtcctgaaggcttgcctggacccccgggacccaagggcgctccaggacttccaggactc
actggtcccaaaggtgtgaggggagtaactggattaccaggattttcaggttctcctgga
cttccaggcatcccaggcaacgctggaccttatggactcgctggtgtaccaggatgcaat
ggttctaagggtgaacaggggttcccaggatttccaggaacaccaggctatccagggcca
cccggtgctgctggtttgaaaggacaaaagggtgatcccgctgaaggagaagacatagaa
cttaacggaaaaggggaccctgggttgccagggttgccaggatttcagggttttccaggg
cctgcaggttttcctgggcctgttggtctacctggccatccgggattcttgggttttcca
ggtgccatgggacctgcagggcctaagggtcacatgggcgataatgtaataggacaaaag
ggagatcagggtgtgaaaggattaacaggaccccctggaccaccaggaacagttattgtg
acactgacgggcgtggacaacagaacggacctcaagggtgagaagggggacaagggagcc
gtgggcgcagctggacttccgggaccctcgggaccccctggagaatccaccagatctgaa
aagggtgctcccggagagccgggctcgcagggaaaacctggaaaggacggtgcccctggc
ttccctggcactgagggacccaagggcaacaggggcctccctgggctaataggagaagct
ggcatcaagggatggaaaggagacattggccctccaggatttcgtggcccaacagaatat
tatgatgcataccagcaaaagggagatgaaggaattccaggaccaccggggcccaaagga
gctcgtggcccacaaggtctgactggtcctcctggagctcctggcatcgctggaccatca
aggcctggcctcagaggagctcccggatggcctggcttgcagggaagtaaaggggaacca
ggacccccagggaaggatgcactggggcctcctggggtcccaggctgtcctgggtcacca
ggccctgcaggggcaccaggacctccaggaccaccaggtgatatcattttccgcatgggt
cctcctggtgatcgtgggctgccagggcgtttagggttcccaggaattccaggaactgat
ggccccaaaggagaaccaggtttcctctgcacagagtgcatgtacaccccaggggccccc
ggcctcccaggactgcccgggttagatggtgtcaaaggaatcccaggaggacaaggtgca
gctggcctgaaaggaagcccagggtccccgggaaggacaggccctccaggatttccaggg
ttcccaggtgcacggggtgatccaggacatgaaggaggaaagggtgaaacacctgagccc
caggggcaagctggtgccccaggagaccccgggctcagagggccaccagggagaaagggc
ttggctgggattcctggaactccaggactgaaaggactaccaggacctagaggtgacccg
gccctaagtggagagaagggggaccagggtcctccaggggatcctggcttccctggaccc
ccaggacctgcaggaccagctggaccacctggctacggacttcagggagagcctggtccc
aagggctcccaaggcgttcctggagcccctggaccacctggagaagccggtcctaagggg
gaacccagtgtttcaacaccagtcccaggccctccaggacctccagggctccctggccgg
gctggctcccaaggaccacctggtctccctggattgaaggggaaatgtgctgagcctggt
cttcctgggcctgacggtgaaccaggaattccaggaattggatttcctgggcctcctgga
cctaaaggaaaccaaggtttcccaggaacaaaaggctccccagggtgtcctggagaaatg
gggaagccagggatacctggaaagccaggcccaccaggatccaagggagaaccagctcta
gccatgcccggagatccagggaggccaggttttccaggagaaagaggctattctggagaa
agaggagacatcggactccctggacctccaggtgtccctggaattcctggaaaagaaggg
tttgatggaccacgaggagatccagggcagcctggaccacctggagaaccaggattacca
ggaaggtgcatagagggtccaaggggagccccgggccttccgggcttaaatggactgcaa
ggacaaccaggcagaagaggtgaaacaggaccaaaaggtgatcccgggattccaggcctg
gataggacaggctttcctggggaacctggaccacccggaatgccaggtcatggaggtgaa
gtgggaccacccggtcacaaaggctatccaggggctccaggagtctcagggccaccaggt
gaaaagggaatgatgggaatgatgggctaccctggaactccgggccctccggggcctcct
gggaacccaggccctccggggcacaggggcagccatggaatcccaggagtaaaaggccag
agaggacttacaggagccaaaggggagccaggagccaaaggaaaccctgggccttcacaa
atatctcacctaacaggagacaaaggagaacctgggctcaaaggatccccaggaaatcca
ggtgagaagggaagtaaaggtgttccaggcttaccaggtctaaaagggcctgacgggcct
cctggaccaccaggaccaccaggcccccgaggagatatggggatcattgggagccctgga
gaggcagggccacgtggtgagccaggtggcacgggaaccatgggcatgccaggttctaaa
ggagaacagggggctttgggacccccaggtctagctggaagaccaggcctgccaggtatc
agcggtctcccaggagataagggagaaccaggttatgcagaaggggcaaggccagggcca
ccaggaccaaagggggatccaggaccaccaggtgacctggggaagaaaggagaaagaggg
ccacctggcccgcccggacatttgggacctgctggagctgcgggagcccctggaagccct
ggaggtgctggccccccaggaaatccgggtcctgatggtgatatggggcttaaaggcatc
aaaggcttccctggacatccaggagtaaaaggccctccaggccttccaggattccctgga
tctcctgggccagtgggaatgagaggcaaccagggccgtgatggaattcctggtccacct
ggagagaaaggagagacaggtttgctgggggtccatccaggccccagagggcaacctggt
gttcaaggagccaaaggatacaggggagcccctggcctgcctggccggcctggcaggaaa
gggtccatgggagatgctgggcctcgaggacccacaggtgcagcaggactgccagggcca
ccaggcccacctggagcaatcaagcccggccaaaaaggaaacagaggcccacccggctca
aggggaaagccaggtgaacctggtcccccgggacctccagggagtccagtcgcaggcata
aaaggagataaaggattcatgggacaccctggtccaaaaggtccaccaggaactatagga
gagatgggaccaccaggtcatccaggagcgccaggtgccccaggtcttccagggctcaga
ggtgatcccggattcagtggattcccaggaatgagaggagagaagggtaatccaggattc
ccagggccacctggaccacctgggccaagtgggccaaaaggaccacccggtgtccgcgga
gcccctggtacgcttcagatcatctcccttccaggtagtccagggccacctggcccacgt
ggagaaccagggatgcaaggagaacctggaccaccagggtctccagggagcccaggacct
tgtgggccaaaagggagaccaggcatggatggaaaaccaggaattcccggaccagctgga
gagaaaggcagcaaaggtttccagggagagcaaggaccacgtgggtcagaaggattgcca
ggtgtgaagggaaaggctggagatgctgggccacctgcacctgggacaacaatgagaggc
tttgtcttcactcgacacagtcaaacaacagcagttcctgcatgtccggaagggacagag
ccactttacagcggctactctcttctttttgtacaaggaaatgagagagcccatggacaa
gaccttggaactcttggcagctgcctgcaacgatttaccacaatgcctttcttattctgt
gacatcaatgaggtctgcaattttgcatctcgaaatgattattcatactggctgtcaaca
ccagctccgatgccaatggacatgactccaattacgggcagggccctcgagccttatatt
agtaggtgcacagtctgtgaaggtcctgcgatcgccattgctgtgcacagtcaaaccaca
gatgttcctccctgccctcaaggctggatttctctatggaaaggattttctttcatcatg
ttcacaagtgcaggttcagagggtgctggacaagcactggcatcccctggctcctgcttg
gaagaattccgagccaatccatttattgaatgtcatggaagaggaacgtgcaactactat
tcaaattcctacagtttctggttggcttcattaaacccagaaaggatgttcagaaaacct
attccatctactgtaaaagctggggagttagaaaaaataataagtcgctgtcaggtgtgc
atgaagaaaagacattga

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