Ochotona curzoniae (black-lipped pika): 121158474
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Entry
121158474 CDS
T11174
Symbol
RXRB
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X1
KO
K08525
retinoid X receptor beta
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03320
PPAR signaling pathway
ocz04659
Th17 cell differentiation
ocz04919
Thyroid hormone signaling pathway
ocz04920
Adipocytokine signaling pathway
ocz04928
Parathyroid hormone synthesis, secretion and action
ocz05200
Pathways in cancer
ocz05202
Transcriptional misregulation in cancer
ocz05207
Chemical carcinogenesis - receptor activation
ocz05216
Thyroid cancer
ocz05222
Small cell lung cancer
ocz05223
Non-small cell lung cancer
ocz05226
Gastric cancer
ocz05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
121158474 (RXRB)
09152 Endocrine system
04920 Adipocytokine signaling pathway
121158474 (RXRB)
03320 PPAR signaling pathway
121158474 (RXRB)
04919 Thyroid hormone signaling pathway
121158474 (RXRB)
04928 Parathyroid hormone synthesis, secretion and action
121158474 (RXRB)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
121158474 (RXRB)
05202 Transcriptional misregulation in cancer
121158474 (RXRB)
05207 Chemical carcinogenesis - receptor activation
121158474 (RXRB)
09162 Cancer: specific types
05226 Gastric cancer
121158474 (RXRB)
05216 Thyroid cancer
121158474 (RXRB)
05222 Small cell lung cancer
121158474 (RXRB)
05223 Non-small cell lung cancer
121158474 (RXRB)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
121158474 (RXRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocz03000
]
121158474 (RXRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ocz03310
]
121158474 (RXRB)
Transcription factors [BR:
ocz03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
121158474 (RXRB)
Nuclear receptors [BR:
ocz03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
121158474 (RXRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
121158474
NCBI-ProteinID:
XP_040839097
LinkDB
All DBs
Position
Unknown
AA seq
537 aa
AA seq
DB search
MSWAARPPFLPERHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAAAAAGEQQS
PEPEPGEAGRDGMGDSGRDSRSPDSSSPNPLTQGIPPPSPPGPPLPASAAPSLGGSGAPP
PPPMPPPPLGSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGAGPPEDVK
PPVLGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYS
CRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEEMP
VDRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHF
SSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRS
LSRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCK
QKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggctgctcgcccgcccttcctccccgagcggcatgccgcggggcagtgtggg
ccggtgggggtgcgaaaagaaatgcattgtggggtcgcgtcccggtggcggcggcgacgg
ccctggctggacccggcggcggcggcggcagcggcggcggcggccggagagcaacaaagc
ccggagccggagccgggggaggctggacgggacgggatgggcgacagcgggcgggactcc
cgaagcccagacagttcctccccaaatcccctgacacaggggatccctcccccttctcct
cctgggccacccctgcccgcttcagcagccccatcccttgggggctctggggcgccaccc
ccacctccaatgccaccccctccgctgggctctcccttcccggtcatcagttcttccatg
gggtcccctggcctgccccctccagctcccccaggattctccgggcctgtcagcagcccc
cagattaactccacagtgtcgctccctgggggtggggctggcccccctgaagatgtgaag
ccacctgtcttaggggtccggggcctgcactgtccaccccctccaggtggccctggagct
ggcaaacggctttgtgcaatctgtggggacagaagttcaggcaaacactatggggtgtac
agctgtgagggctgcaaaggcttcttcaaacgcaccatccgcaaggacctgacctactcg
tgtcgcgacaacaaggactgcacggtggacaagcgccaaaggaaccgctgccagtactgc
cgttaccagaaatgcctggccacaggcatgaagagggaggcggtacaggaggagcgtcag
cgggggaaggacaaagatggggatggggagggggctgggggagcccccgaggagatgccc
gtggacaggatcctggaggcagagcttgctgtggaacagaagagtgaccagggcgtggag
ggccctgggggaaccgggggtagcggcagcagtccaaatgatcctgtgactaacatctgc
caggcggctgacaagcagctgttcacgctggttgagtgggcaaagaggatcccacacttt
tcctccttgcctctggatgaccaggtcatattgctgcgggcaggctggaatgaactcctc
attgcttctttctcccaccggtctatcgatgtccgagatggcatcctcctggccacaggt
cttcatgtgcatcgcaactcagcccattctgcaggcgtgggagccatctttgatcggtcc
ctctccagggtgctgacagagctagtgtccaaaatgcgtgacatgaggatggacaagaca
gagcttggctgcctgagggcaatcattctgtttaatccagatgccaagggcctctccaac
ccgagcgaggtggaggtcctgcgggagaaggtgtatgcgtccctggagacctactgcaaa
cagaagtaccctgagcagcagggacggtttgccaagctgctgctacgtcttcctgccctt
cgctccatcggccttaagtgtctagaacatctgtttttctttaagctcattggtgacacc
cccatcgacaccttcctcatggagatgcttgaagctccccaccagctggcctga
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