Ochotona curzoniae (black-lipped pika): 121159224
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Entry
121159224 CDS
T11174
Name
(RefSeq) LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 5-like
KO
K22803
structural maintenance of chromosomes protein 5
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocz03400
]
121159224
DNA repair and recombination proteins [BR:
ocz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
121159224
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
Motif
Other DBs
NCBI-GeneID:
121159224
NCBI-ProteinID:
XP_040840133
LinkDB
All DBs
Position
Unknown
AA seq
951 aa
AA seq
DB search
MRWSGSAGSNQSDGNRTPGTVGKDSDKVGEFAKLSKIELLEATEKSIGPPEMHMYHCELK
NFREKEKQLETTCKEKTEYLEKMIQRNERYKQDVERFYERKRHLDLIEMLEAKRPWVEYE
SVRQEYEEVKQARDAVKDEVKRLKEGQIPMTRRMEEIEAQRHGLEAQIKQKAADIKEASQ
KCKQKRDLIERXDKHIEELQQALIVKQNEEDDRQRRISNTCKMIADLQNEVNSAENXENL
QPQIEAVTNDLSQVQDEKALCEGEIINKRREKQTLEKERKNVSDHILHFDHLMNQKEDKL
RQRYRDTYDAILWLRSNRDKFKQRVCEPIMLTINMKDNKNAKYIENHISSNDLRTFVFES
REDMEVFLKEVHDNKKLIVNAVIAPRSSHTARLPSRPLNKLKQYGFISYLRELFNAPDLV
MSYLCYQYHIHEVPVGTERTREQIERVIQETRLQQFYTAEENYVVKTSFYSNKLISSNTA
LKEAQFLTVTVDLEQRRHLEEQLKEITMKLQSVESELTGLCEKSKLLECRDNDLRQKKKG
LLERKTKKRQLEQKIKSKQGSLKLMEQDTCNLKEEEQKVATKIKEINIQKAKLVTELTNL
MKICTSLHKQKVGLILQNTTMISEKNKLESDYMAVSSQLRLTEQRYGELDESRQRLLQKC
KELMKRARQVCDLGAEQTVSPEYQTQVPTIPNGHSSSPPWYAVLAFQDLPNTLDEIDALL
TEERSRASCFTGLNPTQVVEEYMKREEEIEQLTEELQGKRIELDKYRESISQVKERWLNP
LKELVEKINEKFSNFFSSMQCAGEVDLHTENEEDYDKYGIRIRVKFRSSTQLHELTPHHQ
SGGERSVSTMLYLMALQELNRCPFRVFDQINQGMDPINERRVFEIIVNTACKENTSQYFF
ITPKLLQNLPYSEKMTVLFVYNGPHMLEPSKWNLKAFQRRRRRITFTQPAQ
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgcgatggagcggctcggccgggagcaatcagtccgacgggaacaggaccccaggaaca
gtgggcaaggattcggacaaagttggagaatttgctaaacttagcaaaattgagctcctt
gaagccactgagaagtccatcggccccccggagatgcacatgtaccactgtgagctcaag
aacttccgggagaaggagaagcagctggagacaacatgcaaagagaaaactgagtatcta
gagaagatgatccaaaggaatgaaagatacaaacaagatgtggaaaggttttatgaacgg
aaacgacatttagacttaattgagatgcttgaagcaaaaaggccctgggtggaatatgaa
agtgtccgtcaggagtacgaggaagtgaagcaggcccgcgatgccgtgaaggacgaggtg
aagaggctgaaggagggccagatccccatgacgcggcggatggaggagattgaagcacag
cgccatggcctggaggctcagatcaagcaaaaggcagcagatatcaaggaagcatctcag
aaatgcaaacagaagcgagacctcattgaaaggtaggataagcatattgaggagcttcag
caggctttaatagtaaaacaaaatgaagaggatgaccgacaacgaagaataagtaatacc
tgcaaaatgatagcagatttgcagaatgaagtgaattcggctgaaaacnntgaaaatctt
cagcctcagattgaggctgtcacgaacgatctgagccaagttcaggatgaaaaggccttg
tgtgaaggcgagatcatcaacaagcggagagaaaagcagacgttagagaaggaaagaaag
aatgtgagcgatcatatattgcattttgatcatcttatgaaccagaaggaggataagctg
agacagaggtaccgtgacacctacgacgccatcttatggctgagaagcaacagagacaag
ttcaagcagagggtgtgtgagcccatcatgctcacgatcaatatgaaagataataaaaat
gccaagtatattgagaatcatatttcatcaaatgacttgagaacctttgtatttgagagt
cgagaagatatggaagttttcctcaaagaggtccatgacaataaaaagctaatagtgaat
gctgtcattgctcccaggagctcacacacagccaggctgccctcgagaccgctcaacaaa
ctcaagcaatacgggtttatctcttacctacgagagctgttcaatgcaccagacctggtc
atgagctacctttgctaccagtatcacatccatgaagtccccgtgggaaccgaaaggacg
agagaacagatcgagcgggtaatacaagaaactcgactgcaacaattttatacagcagaa
gaaaactatgtggtgaaaacatctttctattcgaacaagcttatttccagtaatacggcc
ctgaaagaggcccagttcctcaccgtgactgtggacctggagcagaggaggcatttggag
gagcagctaaaggaaattactatgaagttgcagtctgtggagtcagaattgactggcttg
tgtgagaaaagcaagctcctggaatgcagagataatgacctgagacagaagaagaagggg
ctgcttgagagaaagaccaagaagaggcagctggagcagaagatcaagtccaagcaggga
agcttaaagctgatggaacaggacacctgcaacctgaaagaggaagaacaaaaagtggcc
accaaaatcaaagaaataaatattcaaaaggcaaaacttgttactgaattaacaaaccta
atgaagatttgtacttcgttgcacaaacaaaaagttggtttaattcttcaaaatactaca
atgatctctgagaagaataaattagaatcggattatatggctgtgtcatcacaactacgc
ctcactgagcagcgttatggtgagctggatgagagcagacagaggttactgcagaagtgc
aaggagctgatgaagagagcccggcaggtgtgcgacctgggtgccgagcagactgtgtcc
cccgagtaccagacacaagtacctaccattccaaatggacacagctcctcacccccatgg
tatgcagtactcgctttccaagatcttccaaacaccttggatgaaattgatgctttgttg
accgaagaaagatcgagagcatcctgcttcacgggcctgaatcctacacaagtggttgaa
gaatacatgaaaagagaagaagaaatcgagcagttaactgaggaactacagggaaagaga
attgaactggataaatacagggagagcatctcccaggtaaaagaaaggtggcttaatcct
ttaaaggagctggtagaaaaaattaatgaaaaattcagcaatttttttagttctatgcaa
tgtgctggtgaagtggatctccatacagaaaatgaggaagactatgacaaatacggaatt
cgtattagagtcaagtttcgcagtagtactcagctgcatgaattaactcctcaccatcaa
agtggaggtgaaagaagtgtttctactatgctgtacctgatggcacttcaagagctgaac
aggtgtccattcagagtatttgaccaaattaaccagggaatggaccccatcaatgaacgg
agagtatttgaaatcattgtaaatactgcctgtaaagagaacacgtctcagtacttcttc
attacaccaaagctcctgcagaatcttccttactcggagaagatgacggtgttgtttgtc
tacaacgggccacacatgctggagccgagcaagtggaacttgaaggctttccaaagacgg
cggcggcgcatcacattcactcagcctgctcagtaa
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