Ochotona curzoniae (black-lipped pika): 121159631
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Entry
121159631 CDS
T11174
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03082
ATP-dependent chromatin remodeling
ocz05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121159631 (SS18)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
121159631 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocz03036
]
121159631 (SS18)
Chromosome and associated proteins [BR:
ocz03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
121159631 (SS18)
GBAF(ncBAF) complex
121159631 (SS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
121159631
NCBI-ProteinID:
XP_040840784
LinkDB
All DBs
Position
Unknown
AA seq
417 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMNASGPPPPPRSHNMPSDGMVGGGPPAPHMQ
NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT
MSQGQPMGNYGPRPNMNMQPNQGPMMHQQPPSQQFNMPQGGGQHYQGQQPPMGMMGQVNQ
GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY
QQPSYPEQGYDRPYEDSSQHYYDGGNSQYGQQQDAYQGPPPQQGYPPQQQYPGQQGYPGQ
QQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggcgttcgcggccccgaggcagcgaggcaagggggagatcactcccgctgca
atccagaagatgttggatgaaaataaccatcttattcagtgtataatggactatcagaat
aaaggaaagacctcagagtgttctcagtatcagcagatgctgcatacaaacttggtatac
ctcgctacaatagcagactctaaccaaaacatgcagtctcttttaccagcaccacccaca
cagaatatgcctatgggtcctggcgggatgaatgcaagcggccctcccccacctccacgc
tctcacaacatgccttcagatggaatggtaggtgggggtcctcctgcgccacacatgcag
aaccagatgaacggccagatgcctgggcctaatcatatgcctatgcagggacccggacct
aatcaactgaatatgacaaacagttctatgaatatgccttcaagtagccatggatccatg
ggcggttacaaccattccgtgccatcatcacagagcatgccagtgcagaatcagatgaca
atgagccaagggcagccaatgggaaactatggccccaggccaaacatgaatatgcagcca
aaccaaggtccaatgatgcatcagcagcctccttcccagcagttcaacatgccccaggga
ggagggcagcactaccaaggacagcagccacctatgggaatgatgggccaagtgaaccaa
ggcaatcatatgatggggcagagacagattcctccgtacagaccacctcagcagggccca
ccacagcagtactcaggccaggaggactattatggggaccagtacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcaatattatcccgatggtcataatgattacggttat
cagcaaccgtcgtatcctgaacaaggctacgataggccttatgaggattcctcacaacat
tactacgacggaggaaattcacagtatggccagcagcaggacgcttaccaaggaccccct
ccacagcagggctacccgcctcagcagcagtacccaggacagcaaggttatccagggcag
caacagggatatggtccttcccagggtggtcctggtcctcagtaccctaattatccacaa
ggacaaggtcagcagtatgggggttacagaccaacacagcctgggccgccacagcccccc
cagcagaggccgtacggatacgaccagggacagtatggaaattaccagcagtga
DBGET
integrated database retrieval system
