Ochotona curzoniae (black-lipped pika): 121160587
Help
Entry
121160587 CDS
T11174
Symbol
CNOT9
Name
(RefSeq) CCR4-NOT transcription complex subunit 9 isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121160587 (CNOT9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocz03019
]
121160587 (CNOT9)
Messenger RNA biogenesis [BR:
ocz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
121160587 (CNOT9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
121160587
NCBI-ProteinID:
XP_040842449
LinkDB
All DBs
Position
Unknown
AA seq
299 aa
AA seq
DB search
MHSLATAAPVPTALAQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSF
GTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLY
PFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKT
VATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLS
DNPRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQVTDPRGIPLPPQ
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcctggcgacggctgcgcctgtgcctactgcactggctcaggtggatagagag
aagatctatcagtggatcaacgagttgtccagtcctgagacaagagaaaatgctttgctg
gagttgagtaaaaaacgagaatctgtccctgaccttgcacccatgctgtggcattcattt
ggtacaattgcagcacttttacaggaaattgtaaatatttatccatctatcaacccacct
accttgacagcacaccagtctaacagagtttgcaatgctctggcattgctgcaatgtgtg
gcttcacacccagaaaccaggtcagcatttcttgcagcacacatcccactttttttgtac
ccgtttttgcacactgtcagcaaaacacgtccatttgaatatcttcggctcaccagcctg
ggagttattggggccctagtaaaaacagatgagcaagaggtaatcaactttttgctgaca
acggaaattatccctttgtgtttgcgcattatggaatctggaagtgaactctctaaaacg
gttgccacatttatcctccagaagattctcttggatgacactgggttggcttacatatgt
cagacttatgagcgtttctcccatgttgccatgatcttgggtaaaatggtcctgcagctg
tccaaagagccttctgcccgtctgctgaagcatgtagtaagatgttatcttcgtctctca
gataaccccagggcacgtgaagcactcaggcagtgcctccctgaccagctgaaggataca
accttcgcccaggtgctaaaagatgacaccaccacgaaacgctggcttgcacaactggtg
aagaacctgcaagagggccaagtcaccgatccccggggtatccccctgccccctcagtga
DBGET
integrated database retrieval system
