Ochotona curzoniae (black-lipped pika): 121160837
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Entry
121160837 CDS
T11174
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03030
DNA replication
ocz03410
Base excision repair
ocz03420
Nucleotide excision repair
ocz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121160837 (RFC5)
03410 Base excision repair
121160837 (RFC5)
03420 Nucleotide excision repair
121160837 (RFC5)
03430 Mismatch repair
121160837 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocz03032
]
121160837 (RFC5)
03036 Chromosome and associated proteins [BR:
ocz03036
]
121160837 (RFC5)
03400 DNA repair and recombination proteins [BR:
ocz03400
]
121160837 (RFC5)
DNA replication proteins [BR:
ocz03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
121160837 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
121160837 (RFC5)
Chromosome and associated proteins [BR:
ocz03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
121160837 (RFC5)
DNA repair and recombination proteins [BR:
ocz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
121160837 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
121160837 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_24
RCF1-5-like_lid
AAA_16
AAA_11
AAA_22
RuvB_N
AAA_14
AAA_assoc_2
DEAD
DUF815
ResIII
AAA_5
AAA_19
TIP49
ATPase_2
PhoH
AAA_30
TniB
AAA_7
nSTAND3
Mg_chelatase
NPHP3_N
Thioredoxin_6
bpMoxR
AAA_25
AAA_3
ABC_tran
AAA_28
Motif
Other DBs
NCBI-GeneID:
121160837
NCBI-ProteinID:
XP_040842856
LinkDB
All DBs
Position
Unknown
AA seq
340 aa
AA seq
DB search
MDSSAGQQQEQPASAKIRNLPWVEKYRPQTLDDLISHRDILSTIQKFINEDRLPHLLLYG
PPGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFK
LVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPE
LMVPRLEHVVEQEKVYVSEDGMKALITLSCGDMRRALNILQSTNMAFDKVTEETVYTCTG
HPLKSDIANILDWMLNQDFSTAYRNIMELKTVKGLALQDILTEIHLFVHRVDFPSSVRIH
LLTKMADIEYRLSVGTNEKIQLSSLIAAFQVTRDLIVSEA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggacagctcagccggacagcagcaggagcagcccgcgtcggccaagatccggaacctg
ccctgggttgaaaaataccggccccagaccctggatgatctcatttcgcatcgggacatt
ctgagtaccattcagaagtttatcaatgaagaccgcctgccgcacctgctcctctacggc
cccccggggactgggaagacgtccaccatcctagcctgtgctaagcagctctacaaagac
aaagaattcggctccatggtcttagagctgaatgcttcggatgaccgagggattgatatt
gttcggggaccaatcctgagctttgccagcacaaggacaatatttaagaaaggctttaaa
ctggtgatcttggatgaagccgatgccatgacccaggatgcccagaatgccttgagaaga
gtgatcgagaaattcacggaaaatactagattttgcctcatctgtaactacctgtccaag
atcatccccgccttgcagtcccggtgcaccaggttccgctttggtcccctgacgccagaa
ctcatggtcccccgcctggagcacgtggtggagcaggagaaggtttacgtaagcgaggat
gggatgaaagctcttataaccctttcctgtggagacatgcggagagctctgaacattctg
cagagtaccaacatggccttcgacaaggtgaccgaggagaccgtctacacctgcacgggc
cacccactcaagtctgacatcgccaacattctggactggatgttgaaccaggattttagc
acagcctataggaacattatggagctgaaaaccgtgaaggggctggcactgcaggacatc
ctgacggagatccacttgtttgtgcacagagttgactttccatcgtcggtccgaatacat
ctcttgaccaaaatggcagatattgagtacagactttccgttggcaccaacgagaagatt
cagctgagttctctcattgccgcttttcaagtcaccagggacctcattgtctcagaggca
tag
DBGET
integrated database retrieval system
