KEGG   Ochotona curzoniae (black-lipped pika): 121161670
Entry
121161670         CDS       T11174                                 
Symbol
VAPB
Name
(RefSeq) vesicle-associated membrane protein-associated protein B/C isoform X1
  KO
K10707  vesicle-associated membrane protein-associated protein B
Organism
ocz  Ochotona curzoniae (black-lipped pika)
Pathway
ocz04979  Cholesterol metabolism
ocz05014  Amyotrophic lateral sclerosis
ocz05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:ocz00001]
 09150 Organismal Systems
  09154 Digestive system
   04979 Cholesterol metabolism
    121161670 (VAPB)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    121161670 (VAPB)
   05022 Pathways of neurodegeneration - multiple diseases
    121161670 (VAPB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ocz04131]
    121161670 (VAPB)
Membrane trafficking [BR:ocz04131]
 Autophagy
  ER-phagy
   Other ER-phagy associated proteins
    121161670 (VAPB)
  Other autophagy associated proteins
   ER-mitochondria tethering complex
    121161670 (VAPB)
SSDB
Motif
Pfam: Motile_Sperm Ig_CFAP65_7th ZapB GIT_CC DegS Cep192_D6 Cep192_D3 Ig_CFAP65_4th ASH bZIP_1
Other DBs
NCBI-GeneID: 121161670
NCBI-ProteinID: XP_040844131
LinkDB
Position
Unknown
AA seq 246 aa
MAKVEQVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGV
IDAGASINVSVMLQPFDYDPNEKSKHKFMVQSMFAPTDTSDMEAVWKEAKPEDLMDSKLR
CVFELPAENDKPHDVEINKIIPATASKTETPTVSKSLPSALDDTEVKKVMEECRRLQGEV
QRLQEENKQLRVTKEEDGLRLRKTAPSHSPISALAAAGKEEGLGTRLLALVVLFFIVGVI
IGKIAL
NT seq 741 nt   +upstreamnt  +downstreamnt
atggcgaaggtagagcaggtcttgagcctcgagcctcagcacgagctcaaattccgaggg
cccttcaccgatgtcgtcaccaccaacctgaagctgggcaacccgacagatcggaatgtg
tgcttcaaagtgaagaccacggcccctcgcaggtactgcgtgcgccccaacagcggggtc
atcgacgcaggggcctccatcaatgtgtccgtgatgttacagcctttcgattatgatccc
aatgagaaaagtaagcacaagtttatggttcagtctatgtttgcgccaactgacacttct
gatatggaagcagtatggaaggaggcaaaaccggaagaccttatggattcaaaacttaga
tgtgtgtttgaattgccggcagaaaatgataaaccacacgatgtagaaataaataaaatt
atacccgctactgcatcaaagacagagactcccacagtgtctaagtcgctgccttctgct
ctggacgacacggaggtgaagaaggtgatggaggagtgtaggaggctgcagggggaagtg
cagaggctgcaggaggagaacaagcagctcagagtcaccaaggaagaagacgggctccgc
ctgaggaagacggcgccgagccacagcccaatttcagccttggccgcagccgggaaggag
gaaggcctcggcacgcggctcctggcactggtggtcttgttcttcatcgtcggtgtgatc
atagggaagattgccttgtag

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