Ochotona curzoniae (black-lipped pika): 121162221
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Entry
121162221 CDS
T11174
Symbol
CTR9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog isoform X1
KO
K15176
RNA polymerase-associated protein CTR9
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocz03021
]
121162221 (CTR9)
Transcription machinery [BR:
ocz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
121162221 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
TPR_6
TPR_Slam
ARM_TT21_5th
ARM_TT21_4th
TPR_9
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
121162221
NCBI-ProteinID:
XP_040845055
LinkDB
All DBs
Position
Unknown
AA seq
1170 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEEF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSD
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVV
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGETEATKE
KKRGAGGRRSKKGGEFDEFVNDDTDDDLPISKKKKKRKGSGSEQEGEEEEGGERKKKKRR
RPPKGEEGSDDEETENGPKPKKRRPPRAEKKKAPKPERLPPSMKGKIKSKAIISSSDDSS
DEDKLKIADEGRPRNSDSDSDDERPKKRASSEESDSDDNQNEAGSEAASPRRPRAQQSDE
DSDSDQPPRKRRASGSEQSDNESVRSARSRSAGSENDSRPASPSAESDRESERGSDNEGS
GQGSGNDSEPEGSNNEASDRGSDHGSDDSD
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggggctccatcgagattcccctccgggacacggacgaggtcattgaacttgac
ttcgatcagttaccggagggagatgaagttatcagtatcctgaagcaggaacacacacag
ctgcacatatggattgccttggcgttggaatactacaagcaaggaaaaacagaagagttt
gtaaagttgttggaagcagcacgtatagatggcaatttggactacagagaccatgagaaa
gatcagatgacttgcttagacacactcgcggcctactatgtgcagcaggctcggaaagag
aagaacaaggacaacaagaaggaccttatcacacaggcgaccttgctgtatacaatggct
gacaaaattatcatgtatgatcaaaaccatttgttgggaagagcctgtttctgtctcctg
gaaggtgacaaaatggaccaagctgatgcacaatttcattttgtgctcaatcagtccccc
aacaatatcccagcccttctcggtaaagcctgcatttcttttaacaaaaaggattataga
ggagctcttgcttattataagaaggccttgcgtaccaacccagggtgtccagcggaagtt
cgtttaggaatgggccattgctttgtgaaactaaacaaactagagaaagctcgtctggca
ttcagcagagccttggagctcaattccaaatgtgtgggagccttggttgggctggctgtt
ctggaactcaacaataaagaggctgattccatcaaaaatggtgtccagcttctttctaga
gcttacactattgaccctagcaaccctatggtattgaaccacttggcaaatcactttttc
ttcaaaaaggattatagtaaagtccagcacctggctctacatgcattccataacacagag
gtggaggctatgcaagcagaaagttgctatcagctggctaggtcgttccacgtgcaggag
gattatgaccaagcttttcagtactactatcaagccacacagtttgcctcgtcctctttt
gtgctaccgttttttggcttgggacaaatgtatatttatcgaggtgacaaagaaaatgca
tctcagtgctttgagaaagttttgaaagcttatcctaataattatgaaactatgaaaatt
cttggctctctatatgctgcctcagaagaccaagaaaaaagagacattgccaagggccat
ttgaagaaggtcacagagcagtatcctgacgatgtggaagcgtggattgaattggcacag
atcttagaacagactgacatacagggtgccctttcagcttacggaacagccacacgaatc
cttcaggagaaagtacaggccgatgtccccccagagattctgaataatgtgggggccctc
cattttcgacttggaaacctgggggaggcaaagaaatattttctggcatcgctggatcgc
gcgaaggcagaagctgagcatgatgagcactattacaatgccatctctgtgacgacgtcg
tacaacctggccaggttgtatgaggcaatgtgtgaattccacgaagcagaaaagttgtat
aaaaatatcttacgagaacatccaaattatgttgactgctatttgcgcctaggagccatg
gccagagataaagggaacttttatgaagcttcggattggtttaaggaagctcttcagatt
aatcaggatcacccagatgcttggtctttgattggtaatcttcatttggcaaaacaagaa
tggggtccaggccaaaagaaatttgagaggatattaaaacagccatccacacagagtgac
acatactccatgctagccctgggcaacgtgtggctccagactttgcatcagcccactcga
gaccgagaaaaggaaaaacgtcatcaagatcgtgctctggccatctacaagcaggtgctc
agaaatgatgccaagaatctgtatgctgccaatggcataggcgctgtcttggcccacaaa
gggtatttccgtgaagctcgtgacgtgtttgcccaagtaagagaagcaacagcagacatc
agtgacgtgtggctgaacttagcacacatctatgtggagcaaaagcaatatatcagcgcc
gtgcagatgtatgaaaactgcctccgaaaattctataagcaccagaacactgaggtggtg
ctctatctggctcgagcactcttcaaatgtggcaagctacaggaatgcaaacagactttg
ctgaaggcgagacacgtggcacccagtgatacagttctcatgtttaacgtggccctggtc
ctgcaaagattagctacgtctgtgctgaaagatgagaaaagtaatctgaaggaagtactt
aatgcggtgaaagaactggaacttgcacatagatacttcagttacctgagtaaagtgggt
gataagatgagatttgatttggccctcgctgctacggaagccaggcaatgttcagactta
ctgagtcaggcacagtaccacgtggctcgggcacggaaacaggacgaagaagagcgggag
ctgcgggccaagcaggagcaggagaaggagctgctaaggcagaaactgctcaaagaacag
gaagagaaacgtctcagagaaaaggaagagcaaaagaaacttctggaacaacgggcccaa
tatgtggagaaaaccaaaaacattctcatgtttaccggtgagacggaagccacgaaagag
aagaagcgaggggctggtggacggcgttcaaagaagggaggagagtttgatgaatttgtc
aatgatgacacagatgatgacttacctatctccaaaaagaagaagaaaaggaagggcagt
ggtagtgaacaagaaggcgaagaagaggagggtggtgagagaaagaagaagaagaggagg
agacctccaaaaggagaagaagggtctgatgacgaagagacagaaaatggccccaaaccg
aaaaagcgccgtcctccgagagcagagaagaagaaggcgcctaagccagaacgcctgcct
ccttcaatgaagggcaagatcaaatctaaagccataatatcctccagtgatgactcttca
gatgaggacaaactgaaaattgctgacgaagggcggcccaggaacagcgacagcgactcg
gatgatgagcggccgaagaaacgggcctcttcagaggagagcgactcggacgacaaccag
aacgaggccggcagcgaggcggccagtccccgcaggccgcgggcccagcagtccgatgag
gactcggacagcgaccaaccgcccaggaagagacgagcctcgggctccgagcagtcagac
aacgagtcggtgaggtcggcccgcagccgctcagcgggctccgagaacgactctcggcca
gcctcacccagtgccgagtcggatcgcgagtcagagcggggctcggataatgagggctct
ggccaaggctctggcaacgactccgagccagagggatccaacaatgaggcttcggaccgg
ggctcagatcacgggtcagatgacagcgactag
DBGET
integrated database retrieval system
