Ochotona curzoniae (black-lipped pika): 121162296
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Entry
121162296 CDS
T11174
Symbol
HDAC5
Name
(RefSeq) histone deacetylase 5
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04371
Apelin signaling pathway
ocz04613
Neutrophil extracellular trap formation
ocz05034
Alcoholism
ocz05203
Viral carcinogenesis
ocz05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
121162296 (HDAC5)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
121162296 (HDAC5)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
121162296 (HDAC5)
05203 Viral carcinogenesis
121162296 (HDAC5)
09165 Substance dependence
05034 Alcoholism
121162296 (HDAC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocz03036
]
121162296 (HDAC5)
Enzymes [BR:
ocz01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
121162296 (HDAC5)
Chromosome and associated proteins [BR:
ocz03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
121162296 (HDAC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
121162296
NCBI-ProteinID:
XP_040845152
LinkDB
All DBs
Position
Unknown
AA seq
1111 aa
AA seq
DB search
MNSPSESDGTSGREPPLEILPRTLHSIPVAVEVKPVLPGTMPSSLGGGGGGSPSPVELRG
ALGGPVDPVLREQQLQQELLALKQQQQLQKQLLFAEFQKQHDHLTRQHEVQLQKHLKQQQ
EMLAAKRQQELEQQRQREQQRQEELEKQRLEQQLLILRNKEKSKESAIASTEVKLRLQEF
LLSKSKEPTPGGLNHSLPQHPKCWGAHHASLDQSSPPQSGPPGTPPSYKLPLLGPYDNRD
DFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGTVISTFKKRAVEITGAGPGVSSV
CNSAPGSGPSSPNSSHGTIAENGFTGSVPNIPTEMLPQHRALPLDSSPNQFSLYTSPSLP
NISLGLQATVTVTNSHLTASPKLSTQQEAERQALQSLRQGGTLTGKFMSTSSIPGCLLGV
ALEGDAGPHGHASLLQHVLLLEQARQQSALIAVPLHGQSPLVTGERVATSMRTVGKLPRH
RPLSRTQSSPLPQSPQALQQLVMQQQHQQFLEKQKQQQQLQLGKILTKTGELPRQPTTHP
EETEEELTEQQEALLGESTLTMPREGSTESESTQEDLEEEEEEEEEEDCIQVKDEEGESG
PEEGPDLEESSAAYKKLFTDAQQLQPLQVYQAPLSLATVPHQALGRTQSSPAAPGSMKSP
PDQPTKHLFTTGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRG
RKATLDEIQTVHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVW
NEMHSSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITA
KLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGSGAPEEVGG
GPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSP
LGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDE
AVLQQKPNTNAVATLEKAIEIQSKHWSCVQRFAAGLGRSLREAQAGETEEAETVSAMALL
SVGAEQAQAATATREHSPRSAEEPMEQEPTL
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgaactctcccagcgagtcggatggcacatcaggccgggaaccacccttggagattttg
ccgcggactttgcacagcatcccggtggcagtggaggtgaagccagtgctgccaggaacc
atgcccagctccctgggtggcgggggcggaggcagcccgagcccggtggagttgcggggt
gctctgggcggccctgtggaccctgtgctgcgtgagcagcagctgcagcaggagcttctg
gcgctcaagcaacagcagcagctgcagaagcagctactgtttgctgagttccagaagcag
cacgaccacctgacccggcagcacgaggtccagctgcagaagcacctcaagcagcagcag
gagatgctggcagccaagcggcagcaggagctggagcagcagcggcagcgggagcagcag
cggcaggaggagctggagaagcagcggctggagcagcagctgctgatcctgcgcaacaag
gaaaagagcaaagagagcgccatcgccagcaccgaggtgaagctccggctccaggaattc
ctcttgtcaaagtcaaaggagcccacgccaggcggtctcaaccattccctcccacagcac
cccaaatgctggggagcccatcatgcttctttggaccagagttcccctccccagagcggc
cccccagggacgcccccttcctacaaactgcctttgctcgggccctatgacaaccgtgat
gacttccctctacgaaagacagcctctgagcccaacttgaaagtgcgttcgaggctaaaa
cagaaggtggccgagcggagaagtagtcccctcttgcgtcgcaaggacgggactgttatc
agcaccttcaagaagagggcggttgagatcacgggcgctgggcctggggtgtcgtctgtg
tgtaacagtgctcctggttccggccccagttcccccaacagctcacatggcaccattgcc
gagaacggcttcaccggctcagtgcccaacatccccaccgagatgctcccccagcaccgg
gccctccctctggacagctcccccaaccagttcagcctctacacgtctccctctctgccc
aacatctccctagggcttcaggccacggtcactgtcaccaactcacacctcaccgcctcc
ccgaagctgtcgacgcagcaggaggccgagaggcaggccctccagtccctgcggcagggc
ggcacgctgacgggcaagttcatgagcacatcatccatcccaggctgcctgctgggtgtg
gcgctggagggtgacgctggcccccacgggcatgcctccttgctgcagcacgtgctgctg
ctggagcaggcccggcagcagagcgccctcatcgctgtgccgctccatgggcagtcccca
ctggtgacaggggaacgtgtggccaccagcatgcggacagtgggcaagctcccacggcac
cggcctctgagccgcacacagtcatcgccactgccgcagagtccccaggccctgcagcag
ctcgtcatgcagcagcagcaccagcagttcctggagaagcagaagcagcagcagcagctg
cagctgggcaagatcctcaccaagacaggggagctgcctaggcagcccacgacacacccg
gaggagactgaggaagagctgacggagcagcaggaggccttgctgggggagagcactttg
accatgccccgtgagggctccacggaaagtgagagtacccaggaggacctggaggaggaa
gaggaggaggaggaagaggaggattgcatccaggtcaaggatgaggagggcgaaagcggc
cccgaggagggacctgacttggaggagtccagtgctgcttacaaaaagctcttcacagat
gcccagcagctgcagcctctgcaggtgtaccaggcacccctcagcctggccactgtgccc
caccaggccctgggccgcacccagtcctcacctgctgctcctgggagcatgaagagcccc
ccagaccagcccactaagcacctcttcaccacaggtgtggtttacgacacgttcatgctg
aaacaccaatgcatgtgtgggaacacacacgtacaccctgagcacgccggccgcatccag
agcatctggtcccggcttcaggagacgggcctgctcagcaagtgtgagcgcattcggggg
cgcaaagctacactggatgaaatccagacagtgcactccgagtaccacactctgctctac
gggaccagccccctcaaccggcagaagttggacagcaagaagctgctgggtcccatcagc
cagaagatgtatgccatgctgccttgtgggggcatcggggtggacagtgacaccgtgtgg
aacgagatgcactcgtccagtgccgtgcgcatggccgtgggctgcctcgtggagctggcc
ttcaaggtggctgcgggcgagctcaagaatggatttgccatcatccggcccccaggacac
cacgccgaggagtctaccgccatgggattctgcttcttcaactcggtagccatcacagcc
aaactcttgcaacagaagctgaacgtgggcaaggtcctcattgtggactgggacattcac
catggcaatggcactcagcaagcattctacaatgacccctccgtgctctacatctccctg
catcgctatgacaatggcaacttctttccgggctctggggctcctgaagaggttggtgga
ggaccaggcgtggggtacaatgtgaatgtggcatggacgggaggtgtggatccccccatt
ggagatgtggagtacctgacagccttcaggacagtggtgatgcccattgcccacgagttc
tcacctgacgtggtcttagtctctgctgggtttgatgccgttgaaggacatctgtctcca
ctgggtggctactctgtcaccgccagatgttttggccacttgaccaggcagctgatgaca
ctggctgggggccgggtggtgctggccctggagggaggccacgacttgaccgccatctgt
gatgcctctgaagcctgtgtctcggctctgctcagcgtggagctgcagcccctagatgag
gcagtcttgcagcaaaagcccaacactaacgcagtggccacgctggagaaagccatcgag
atccagagcaaacactggagctgcgtgcagaggtttgctgctggtctgggccgctccctg
cgagaggcccaggcaggtgagacggaggaggccgagactgtgagcgccatggccttgctg
tcagtgggggcagagcaggcccaggctgccaccgctacccgggagcacagtcccaggtcg
gcagaggagcccatggagcaggagcccaccctgtga
DBGET
integrated database retrieval system
