KEGG   Ochotona curzoniae (black-lipped pika): 121162423
Entry
121162423         CDS       T11174                                 
Symbol
CPSF4L
Name
(RefSeq) putative cleavage and polyadenylation specificity factor subunit 4-like protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
ocz  Ochotona curzoniae (black-lipped pika)
Pathway
ocz03015  mRNA surveillance pathway
ocz05164  Influenza A
Brite
KEGG Orthology (KO) [BR:ocz00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    121162423 (CPSF4L)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    121162423 (CPSF4L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ocz03021]
    121162423 (CPSF4L)
   03019 Messenger RNA biogenesis [BR:ocz03019]
    121162423 (CPSF4L)
Transcription machinery [BR:ocz03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     121162423 (CPSF4L)
Messenger RNA biogenesis [BR:ocz03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     121162423 (CPSF4L)
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 Torus zf-CCCH_2 zf-CCCH_3 zf-CCCH_4 LPD16
Other DBs
NCBI-GeneID: 121162423
NCBI-ProteinID: XP_040845340
LinkDB
Position
Unknown
AA seq 166 aa
MQEAIAGLERFTFAFEKDVELQRGTGLQPFEGMDKSGSAVCNFFTKGLCGKGKLCPFRHE
RGEKTVVCKHWLRGLCKKGDHCRFLHHYDTSRMPECYFYSKFGDCSKKDCTFLHVKPASK
SWDCPWYDQGFCKDGPLCKYRHVRKTMCLRYFFGFCPEGPRCQFAQ
NT seq 501 nt   +upstreamnt  +downstreamnt
atgcaggaagccattgctggcttggagcgattcaccttcgccttcgagaaggatgtggag
ctacagagaggcacggggcttcagcccttcgagggcatggacaaatcgggctcagctgta
tgcaacttcttcacaaaaggactctgtgggaaagggaagctctgccccttccggcatgaa
cggggggagaagacggtggtgtgcaagcattggctgcgggggctgtgcaagaagggtgac
cactgcaggttcctgcaccactacgacacctctaggatgcctgagtgctacttttactcc
aagttcggtgactgcagcaagaaggactgtaccttcctgcacgtgaagccagcttccaag
tcctgggactgcccttggtatgaccaaggcttctgcaaggacggccccctgtgtaaatac
cgccatgtgcgcaaaacgatgtgtctccgctatttctttggcttctgccctgaggggccc
aggtgccagtttgcccagtaa

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