Ochotona curzoniae (black-lipped pika): 121162450
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Entry
121162450 CDS
T11174
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03013
Nucleocytoplasmic transport
ocz03015
mRNA surveillance pathway
ocz03040
Spliceosome
ocz05014
Amyotrophic lateral sclerosis
ocz05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121162450 (ALYREF)
09122 Translation
03013 Nucleocytoplasmic transport
121162450 (ALYREF)
03015 mRNA surveillance pathway
121162450 (ALYREF)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121162450 (ALYREF)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
121162450 (ALYREF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocz03019
]
121162450 (ALYREF)
03041 Spliceosome [BR:
ocz03041
]
121162450 (ALYREF)
Messenger RNA biogenesis [BR:
ocz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
121162450 (ALYREF)
TREX complex
121162450 (ALYREF)
Spliceosome [BR:
ocz03041
]
Complex C
Other components
EJC/TREX
121162450 (ALYREF)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
121162450 (ALYREF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
FYTT
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
121162450
NCBI-ProteinID:
XP_040845379
LinkDB
All DBs
Position
Unknown
AA seq
255 aa
AA seq
DB search
MADKMDMSLDDIIKLNRSQRGGGGRGRGRGRAGAQGGRGGGGAQAAARVSRGGGPLRNRP
ALARGAAGGRNRPAPYSRPKQLPDKWQHDLFDSGFGAGAGVETGGKLLVSNLDFGVSDAD
IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLV
TSQIDTQRRPAQSISRGGMARTRGSGAFGGGGARRGARGGSRGRGRGAGRSAKQQLSAEE
LDAQLDAYNARMDTS
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaagatggacatgtctctggacgacatcatcaagctgaaccgcagccagcgc
ggcggcggcggccggggccggggccgaggccgggccggcgcccagggcggccgcggcggc
ggcggggcgcaggcggccgcgcgcgtgagcaggggcggcgggcccctccggaaccggccg
gccttggcccgcggcgcggccggcggcaggaaccggccggcgccctacagcaggcccaag
cagctccccgataagtggcagcacgacctcttcgacagcggcttcggggccggcgccggc
gtggagacgggcggaaagttgctcgtgtccaatctcgactttggagtatcggacgccgac
atccaggaactcttcgcagagttcgggacgctcaagaaggcggccgtgcactatgaccgc
tcgggccgcagcctcggtacggccgacgtgcacttcgagcggaaagcagacgctctgaaa
gccatgaaacagtacaacggtgtccccctagacggccgccctatgaacattcagcttgtc
acgtcacagatcgacacccagcgaaggcctgcccagagcattagcagaggcggcatggcc
aggacccgaggttcgggagccttcggcggcgggggcgcccggagaggtgcccgtggtggc
agccgaggaaggggcagaggcgccggcagaagcgcaaagcagcagctgtctgcggaggag
ctggacgcccagctggacgcctacaatgctcggatggacactagctaa
DBGET
integrated database retrieval system
