Ochotona curzoniae (black-lipped pika): 121162663
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Entry
121162663 CDS
T11174
Symbol
TMC6
Name
(RefSeq) transmembrane channel-like protein 6 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
121162663 (TMC6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocz02000
]
121162663 (TMC6)
03037 Cilium and associated proteins [BR:
ocz03037
]
121162663 (TMC6)
Transporters [BR:
ocz02000
]
Other transporters
Pores ion channels [TC:
1
]
121162663 (TMC6)
Cilium and associated proteins [BR:
ocz03037
]
Other cilia and associated proteins
Stereociliary proteins
121162663 (TMC6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
121162663
NCBI-ProteinID:
XP_040845792
LinkDB
All DBs
Position
Unknown
AA seq
807 aa
AA seq
DB search
MAQPLPFVLDVPAEVENADLDPSPCDESEVHDSFHRLIQEQSLRAAQEGLELQERQAAAT
AAGSGSQNLLGPEGPVVHSTATLQILASMPSRTIGRSRGAIISQYYNRTAQRRWRRGSSR
PLLGDLVPSARPSLRLRDLEVDSSAQEEEAEKRSLLVQELQGLSGTQRDQLLRGMPLSLA
EKRSLREKSRAPRGRRGRTGISACCGQLGDSFILAWHSLGLALLAGLQALVPWRDALKQI
GGQFGSSVLCYFLFLKTLLGLNLLLLPLLLGLLVGVQAAFPPPPAATSTFTGLELLTGGG
RFTHTLMYYGYYSNATLNQPCEAPGDAGQCAPRAGSLPYNMPLAYLFTMGAAFFVTCITL
VYSMSRSFGESYRVGSTSGVHALTVFCSWDHKVTQRRASRLQHDTLRTRLKELLAEWQLR
QSPRSTCGKLRRTCVLGLVWLLCLGATLGCCVAVLVFSEAQTWVAEDQEVALLALPLVVS
LLNLGASYLFRGLAALERLDSPLLEVYVAVCRNLILKMTVLGILCYHWLGRRVPTLQGRC
WENFVGQELYRFIVTDLAFTLLDSLLGELVWRLISEKRLSRRKPEFDIARNVLDLIYGQT
LIWLGVLFSPLLPAVQVLKLLLLFYVKKASLLANCQAPRRPWLACRMNTVFCTLLCFPSF
LGAAIFLCYAVWQVRPSGTCGPFRTLASMYEAGTVWVHHLERAGPGVSWLPWAHRYLVEN
TSFLFLLSALLLAVIYLNIQVVKGQRKVICLLKEQIFNEGEDKIFLINKLHSIYEKKERR
AAGAEEPVSPGPLPVARATPAGMASVS
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggcccagccactgccctttgtgctggatgttcctgccgaggtcgagaatgcagacctg
gatcccagcccctgcgatgagagcgaggtgcatgactccttccatcggctcatccaggag
cagagcctgcgcgcggcccaggagggcctggagctgcaggaaaggcaggcggcggccaca
gctgcaggcagtggttcccagaacttgctggggcccgaggggcctgtggtgcacagcacg
gccactctgcagatcctggccagcatgcccagtcggaccatcggccgcagccgaggcgcc
atcatctcccagtactacaaccgcacggcccagcggcgctggcggcgtgggagcagccga
cccctgctcggggacctggtcccctcggcccggcccagcctccgcctgcgtgacctggag
gtggactcgtcggcccaggaggaggaggcagagaagcggagcctgctggtgcaggagctg
cagggcctgtcaggtacccagcgggaccagctgctgcggggcatgccactgagcctggct
gagaagcgcagcctgcgagagaagagccgggcgcccaggggccggcgaggtcgcactggg
atctcggcctgctgcggccagctcggggactccttcatcctggcctggcacagcctgggg
ctggcgctgctcgcgggcctgcaggccctggtgccctggcgcgacgcgctgaagcagatc
ggcggccagtttggctccagcgtgctctgctacttcctgttcctcaagacgctgctgggc
ctgaacctgctgctgctgccgctgctgctgggcctcctggtgggcgtgcaggctgccttc
ccgccgccacctgccgccaccagcaccttcactggcctggagctgctcacgggtgggggc
cgcttcacgcacacgctcatgtactatggctactacagcaatgccaccctgaaccagccg
tgcgaggcccccggggacgcgggccagtgtgccccccgcgctggcagcctgccctacaac
atgcccctggcttacctcttcaccatgggtgctgctttctttgtgacctgtatcaccctg
gtgtacagcatgtcccgctccttcggggagagctaccgcgtgggcagcacctccggcgtg
catgcactcaccgtcttctgctcctgggaccacaaggtgacccagcggcgggcctcccgc
ctgcaacacgacaccctccgcacgcggctcaaggagctgctggccgagtggcagctgcgg
cagagtccgcggagcacgtgcgggaagctgcggcgtacctgtgtgctggggctcgtgtgg
ctgctgtgcctcggagccacgctgggctgctgcgtggctgtgctggtcttctcggaggcc
cagacctgggtggctgaagaccaggaagtggccctgctggcactgcccctggtggtctct
ctcctcaacctcggtgcttcctacctgttccgcggcctggccgccctggagcgcctggac
tccccgctgctggaggtgtatgtggctgtctgcaggaacctgatcctgaagatgaccgtt
ctgggcatcctctgttaccactggctgggccgccgcgtgccgaccctgcagggccgctgc
tgggagaacttcgtgggtcaggagttgtaccggttcatagtcacggacctggccttcacg
ctgctggactcgctgctcggggagctggtgtggaggctcatctctgagaagaggctcagc
cgcaggaagcccgagtttgacattgcacggaacgttctggacctgatctatgggcagact
ctgatctggctgggggttctcttctcgccactccttcctgccgtgcaggtcctgaagttg
ctactcctcttttacgtcaagaaggccagcctcctggccaactgccaggcgccgcggcgg
ccgtggctggcgtgtcgcatgaacaccgtcttctgcacgttgctctgcttcccgtccttc
ctgggcgccgccatcttcctgtgctatgccgtctggcaggtgaggccttccggcacgtgc
ggtcccttccgcaccctggccagcatgtatgaggcgggcacagtgtgggtgcatcacctg
gagcgcgcaggcccgggggtgtcctggctgccctgggcgcatcgctacctggtggagaat
acctccttcctcttcctgctgtccgccctgctgctggcggtcatctacctcaacatccag
gtggtgaagggccagcgcaaggtcatctgtctcctcaaggagcagatcttcaacgagggg
gaggacaaaatcttcttgatcaacaagctccattccatctacgagaagaaggagaggagg
gccgctggagccgaggagcctgtgtcgcccgggccactgcctgtcgcccgggccacgcct
gctggaatggctagtgtctcatag
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