KEGG   Ochotona curzoniae (black-lipped pika): 121163253
Entry
121163253         CDS       T11174                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
ocz  Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:ocz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ocz03036]
    121163253 (KDM4B)
Enzymes [BR:ocz01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     121163253 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     121163253 (KDM4B)
Chromosome and associated proteins [BR:ocz03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    121163253 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN Tudor_3 LBR_tudor PHD DUF4537 DUF7141 SLX1_C
Other DBs
NCBI-GeneID: 121163253
NCBI-ProteinID: XP_040846599
LinkDB
Position
Unknown
AA seq 1109 aa
MGSEDHGAQNPSCKIMTFRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKPRQTY
DDIDDVVIPAPIQQVVTGQSGLFTQYNIQKKAMTVGEYRRLANSEKYCTPRHQDFDDLER
KYWKNLTFVSPIYGADISGSLYDEDVSQWNIGNLHTILDMVERECGTIIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFPGSSQGCDAFLR
HKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY
GKVASQCTCRKDMVKISMDVFVRILQPERYELWKQGKDLTVLDHTRPTALSSPELSSWSA
SRASLKAKLLRRQISLKENRHWKKAEEERKPSLERKKEQTKKPGPASHRKRTQPKKPKPE
DSKSPVEEAAGAALLEEAAGSTKEEAAQEADPEEEEEGLQPVPGREAEGSEEDGRGKMRP
AKAKGDRRKRNCTPLSPPLPPAPSVPGPAEEALRLPPPVELPVLAPGPGTAEESPPLAPL
NVVPPETPGDEQEVKPRPIIPMLYVVPRAGTAGADRERVASPQASEHLAQKDQAAPMELT
GPEESKARAEEVQVPSVSPKLRVEIKRSRRHPLGRPPTRSPLSVVKQEASSDEEAFPLSA
EEDAGDPDALRSPLSLQWKSQAVSFQAERKLNAAAARTEPYCAICTLFYPYSQALQTEKE
APPASLGEGPSAAPPAGSRRRTRPLIPELCFTCSSENPEALPASSGVGDDGTSPLMVCSK
CCLQVHASCYGIRPELVNEEWTCSRCTAHAWNAECCLCNLRGGALQVTTDRRWIHVLCAI
AVPEARFLNVTERHPVDISAIPEQRWKLKCVYCRKRMKKVSGACIQCSYEHCSTSFHVTC
ALAAGVLMEPDDWPYVVSITCLKHKPGGQTVQLLRSVSLGQAVLAKHRSGLYYRGRVIGT
ATQTFYEVNFDDGSYSDNLHPESITSRDCVRLGPPPEGELVELRWTDGNLYKARFISSTT
SHLYQVEFEDGSQLTVKRGDIFTLEEELPKRVRSRLSLSTGAPQEPDAPGEAKAAKRPRV
GAEDAGQSLDYLAFMENLLQAQAQPGAPF
NT seq 3330 nt   +upstreamnt  +downstreamnt
atggggtccgaggaccacggggcgcagaaccccagctgtaagatcatgactttccgcccc
accatggaggagttcaaagacttcaacaaatacgtggcttacatcgagtcgcagggcgcc
caccgggcgggcctggccaagatcatcccccctaaggaatggaagccgcgccagacgtac
gatgacattgacgacgtggtgatcccggcccccatccagcaggtggtcacgggccagtcg
gggctcttcacgcagtacaacatccagaagaaggccatgaccgtgggcgagtaccggcgc
ctggccaacagcgagaagtactgcaccccgcggcaccaggacttcgacgacctagagcga
aagtactggaagaatctcaccttcgtgtcgcccatctacggggccgacatcagcggctcg
ctgtacgacgaggacgtgtcgcagtggaacatcgggaacctacacaccatcctggacatg
gtggagcgcgagtgcggcaccatcatcgagggcgtcaacacgccctacctctacttcggc
atgtggaagaccacgttcgcctggcacacggaggacatggacctgtacagcatcaactac
ctgcacttcggggagcccaaatcctggtacgccatccctccggaacacggcaagcgcctg
gagcggctggccattggattcttccccggcagctcgcagggctgtgacgctttcctgcga
cacaagatgactctcatctcgcccatcatcctcaagaagtacgggatccccttcagccgg
atcacgcaagaggccggggagttcatgattacctttccctacggctaccacgccgggttc
aaccacgggttcaactgcgccgagtcgaccaacttcgccaccctgcggtggatcgattat
ggcaaagtggccagtcagtgcacgtgccggaaggacatggtgaagatctccatggacgtg
ttcgtgcgcatcctgcagccggagcgctacgagctgtggaagcaaggcaaggacctcacc
gtgctggaccacacgcggcccacggccctcagcagccccgagctcagctcctggagcgcc
tcccgggcctcgctcaaggccaagctcctgcgcagacaaattagtctgaaggaaaacaga
cactggaaaaaggctgaggaggagagaaaaccgagtctagagagaaagaaagagcagacc
aaaaagccggggccggcgtctcacaggaagcggacacagcccaagaagcccaagccagaa
gactccaagtcccccgtagaggaggcggccggggcagccctcctggaggaggccgcgggc
agcaccaaggaagaggcagcacaggaggccgaccccgaggaggaggaggaggggctgcag
ccagtgccgggccgcgaggctgagggctcagaagaggacgggaggggcaagatgcggccc
gccaaggccaagggtgaccgcaggaagagaaactgcactcccctgtcgcccccgctgccc
ccagcgccatcggtgcctggccccgctgaggaggcgctgcggctgccacctcccgtggag
ctcccggtgctggccccgggccctgggactgcagaggagagtccaccactggcacccctc
aacgtggtgccccccgagacacccggcgatgagcaggaagtcaagccaaggcccatcatt
cccatgctgtacgtggtgccccgggctggcacagcgggggccgatagggagcgggtggcc
agcccacaggcctcggagcacttggcccagaaggatcaggctgcccccatggaactgacg
gggccggaggagtccaaggccagggctgaggaggtgcaggtcccatctgtgtcgcccaag
ctgagggtggagatcaagaggagccggcgtcaccccctgggcaggccacccacgcgctcc
ccactgtccgtggtcaagcaggaggcttccagcgacgaggaagcgttccctctgtctgcg
gaggaggatgcgggcgaccccgacgccctgaggtccccgctgtccctgcagtggaagagc
caggcggtcagcttccaggccgagagaaagctgaacgcggcggctgcgcggacagagccg
tactgtgccatttgcaccctcttctacccttacagccaggccctgcagacagagaaggag
gcgcccccggcctccctcggggagggcccctctgctgccccgcctgccgggagccgtcgg
aggacgcggccgctcatccccgagctgtgcttcacctgcagcagcgagaaccccgaggcc
ctgcccgccagctccggtgtcggcgacgacggtaccagtccgctgatggtctgctccaag
tgctgcctgcaggtgcacgccagttgctatggcatccgccccgagctggttaacgaggaa
tggacgtgttcccggtgcacagcccacgcctggaacgcggagtgctgcttgtgtaacctc
cgggggggcgccctgcaggtgaccaccgacaggaggtggatccacgtgctgtgtgccatc
gcggtccccgaggcccggttcctcaacgtgactgagcgccaccctgtggacatcagcgcc
atccccgagcagcggtggaaactgaagtgcgtgtactgccggaagcggatgaagaaggtg
tcgggcgcctgcatccagtgctcctacgagcactgctccacctccttccacgtgacctgc
gccctggccgccggcgtcctcatggagcccgacgactggccctacgtggtctccatcacc
tgcctcaagcacaagcccgggggccagacggtgcagctcctgcggtcggtgtcactgggc
caggccgtgctggccaagcaccgcagtggcctctactaccgtggccgtgtcatcggcacg
gccacacagactttctacgaggtcaactttgacgacggctcctacagcgacaacctgcac
cccgagagcatcacgagcagggactgtgtgcggctgggccccccgcccgagggcgagctg
gtggagctgcggtggacggacggcaacctgtacaaggccaggttcatttcctccaccacg
agccacctctaccaggtggagtttgaggacgggtcccagctgacggtgaagcgaggggac
attttcaccctggaggaagagctgcccaaacgcgtgcggtcccggctgtcactgagcacc
ggggccccgcaggagccggacgccccaggagaggccaaggccgccaagcgcccgcgggtg
ggcgccgaggacgcgggccagagcctcgactacctggccttcatggagaacctgctgcag
gcccaggcccagcccggggcccccttctag

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