Ochotona curzoniae (black-lipped pika): 121163501
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Entry
121163501 CDS
T11174
Symbol
PCDH17
Name
(RefSeq) protocadherin-17
KO
K16499
protocadherin delta 2
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocz04515
]
121163501 (PCDH17)
Cell adhesion molecules [BR:
ocz04515
]
Cadherins
Protocadherins
121163501 (PCDH17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
Cadherin_4
NUC153
PepSY
Motif
Other DBs
NCBI-GeneID:
121163501
NCBI-ProteinID:
XP_040846969
LinkDB
All DBs
Position
Unknown
AA seq
1162 aa
AA seq
DB search
MYLSICCCFLLWAPALTLKNLNYSVPEEQGAGTVIGNIGKDARLQPGLPPAERGGGGGGR
SKSGSYRVLENSAPHLLDVDADSGLLYTKQRIDRESLCRHNAKCQLSLEVFANDKEICMI
KVEVQDINDNAPSFPSDQIEMDISENAAPGTRFPLTSAHDPDAGENGLRTYLLTRDDHGL
FALDVKSRGDGTKFPELVIQKALDREQQNHHTLVLTALDGGEPPRSATVQINVKVIDSND
NSPVFEAPSYLVELPENAPLGTVVIDLNATDADEGPNGEVLYSFSSYVPDRVRELFSIDP
KTGLIRVKGNLDYEENGMLEIDVQARDLGPNPIPAHCKVTVKLVDRNDNAPSIGFVSVRQ
GALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGPGGGGGGLGGPGGSVPFKLEEN
YDNFYTVVTDRPLDRETQDEYNVTIVARDGGSPPLNSTKSFSVKILDENDNPPRFTKGLY
VLQVHENNIPGEYLGSVLAQDPDLGQNGTVSYSILPSHIGDVSIYTYVSVNPTNGAIYAL
RSFNYEQTKAFEFKVLAKDSGAPAHLESNATVRVTVLDVNDNAPVIVLPTLQNDTAELQV
PRNAGLGYLVSTVRALDSDFGESGRLTYEIVDGNDDHLFEIDPSSGEIRTLHPFWEDVTP
VAELVVKVTDHGKPTLSAVAKLIIRSVSGSLPEGVPRVNGERHPWDVSLPLIVTLSTISI
ILLAAMITIAVKCKRENKEIRTYNCRIAEYSHPQLGGGKGKKKKINKNDIMLVQSEVEER
NAMNVMNVVSSPSLATSPMYFDYQTRLPLSSPRSEVMYLKPASNNLTVPQGHAGCHTSFT
GQGTNASETPATRMSIIQTDNFPAEPNYMGSRQQFVQSSSTFKDPERASLRDSGHGDSDQ
ADSDQDTNKGSCCDMSVREALKMKTSSTKSQPLEQEPEECVNCTDECRVLGHSDRCWMPQ
FPAANQAENADYRTNLFVPTVEANVETETYETVNPTGKKTFCTFGKDKREHTILIANVKP
YLKAKRALSPLLQEVPSASSSPTKACIEPCASTKGSLDGCEAKAGALAEASSQYLPTDSQ
YLSPSKQPRDPSFLASEQMARVLADVHSRASRDSSEMGTVLEQLDHPNRDLGRESVDAEE
VVREIDKLLQDCRGNDPVAVRK
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgtacctatccatctgttgctgtttcctcctctgggcccccgccctgacgctcaaaaac
ctcaactactcggtcccggaggagcaaggggccggcacggtcatcggtaacatcggcaag
gatgctcgcctgcagccggggctcccaccggccgagcgcggcggcggcggcggcgggcgc
agcaagtccggcagctaccgggtgttggagaactcggcgccgcacctgctggacgtggac
gcggacagcggactcctgtacaccaagcagcggatcgaccgcgagtccctgtgccgccac
aacgccaaatgccagctgtccctggaggtgttcgccaacgacaaggagatctgcatgatc
aaggtagaggtccaggacatcaacgacaacgctccctccttcccgtccgaccagatcgaa
atggacatttccgagaacgcggcccccggcacccgcttcccgctcaccagcgcgcacgac
cccgatgcgggcgaaaacggcctccgcacctacctgctcacccgcgacgaccacggcctc
ttcgccctggacgtcaagtcccgtggcgacggcaccaagttcccggaactggtcattcag
aaggcgctggaccgagagcagcaaaaccaccacacgttggtgctgaccgccctggacggc
ggcgaaccgccgcgctcggccacggtgcagatcaacgtgaaggtgatcgactccaacgac
aacagcccggtcttcgaggctccctcctacctggtggagctgcccgagaacgctccgctg
ggcacggtggtcatcgacctgaacgccaccgacgcggacgaggggcccaacggcgaggtg
ctctactccttcagcagctacgtgcccgaccgcgtccgggaactcttctccatcgacccc
aagaccggcctcatccgcgtcaagggcaacctggactatgaggagaacggcatgttggag
atcgacgtgcaggcccgagacctggggcccaaccccatcccggcccactgcaaagtcacg
gtcaagctcgtcgaccgcaacgacaacgcgccgtccatcggtttcgtctccgtacgccag
ggggcgctcagcgaggccgccccgcccggcacggtcatcgccctggtgcgggtcaccgac
cgggactcgggcaagaacgggcagctgcagtgtcgggtcctggggggaggagggccgggc
ggcggcggcgggggcctgggcgggcccgggggctcggtccccttcaagctggaggagaac
tatgacaacttctacacggtggtgacggaccggccgctggaccgggagacccaggacgag
tacaacgtgacgatcgtggcgcgggacgggggctcgcctcccctcaactccactaagtcg
ttctcggtcaagatcctggacgagaacgacaacccgccgcgcttcaccaaggggctctac
gtgctgcaggtgcacgagaacaacatccccggcgagtacctgggctccgtgctggcccag
gaccccgacctgggtcagaacggaaccgtgtcctattccatcctgccctcacacatcggc
gacgtgtccatctacacctacgtctccgtgaaccccaccaacggggccatctacgccctg
cgctcctttaactacgaacagaccaaggctttcgagttcaaggtgctcgccaaggactcg
ggggcgccggcgcacctggagagcaacgccacggtgagggtgaccgtgctggacgtgaac
gacaacgctccggtgatcgtgctgcccactctgcagaacgacaccgccgagctgcaggtg
ccgcgcaacgccggcctgggctacctggtgagcaccgtgcgagccctggacagcgacttt
ggcgagagcgggcgcctcacctacgagatcgtggacggcaacgacgaccacctgtttgag
atcgatccgtcgagcggcgagatccgcacgctgcaccccttctgggaagacgtgacgccc
gtggcggagctggtggtgaaggtgacggatcacggcaagcccaccctgtcggccgtggcc
aagctcatcatccgctcggtgagcggctccctgcccgagggcgtgccccgggtgaacggc
gagcggcacccctgggacgtgtcgctgccgctcatcgtgaccctgagcaccatctccatc
atcctcctggcggccatgatcaccatcgccgtcaagtgcaagcgcgagaacaaggagatc
cgcacttacaactgccgcatcgccgagtacagccacccgcagctgggcgggggcaagggc
aagaagaagaagattaacaaaaacgatatcatgctggtgcagagcgaagtggaggagagg
aacgccatgaacgtcatgaacgtggtgagcagcccctccctggccacctcccccatgtac
ttcgactaccagacccgcctgcccctcagctcgccccggtccgaggtgatgtacctcaaa
ccggcctccaacaacctgactgtcccgcaggggcacgcaggctgccacaccagcttcacc
ggacaagggactaatgcgagcgagacccctgccactcggatgtccataattcagacagac
aattttcccgcagagcccaattacatgggcagcaggcagcagtttgttcaaagtagctcg
acgtttaaggacccagaaagagccagcctgagagacagtgggcacggggacagtgatcag
gctgacagtgaccaagacactaacaaaggctcctgctgtgacatgtctgttagggaggcg
ctcaagatgaaaacttcttcaactaaaagccaaccacttgaacaagaaccagaagagtgt
gttaattgcacagatgaatgccgagtgcttggtcattctgacaggtgttggatgccacag
ttccctgcagccaatcaggctgaaaatgctgattaccgcacaaatctctttgtacccacc
gtggaagctaatgttgagactgagacttacgaaactgtgaatcccactgggaaaaagact
ttttgtacatttggaaaagacaagcgagagcacactattctcattgccaatgttaaacct
tatttaaaagccaaacgtgccctgagccctctcctccaagaggtcccttcagcatcaagc
agcccaaccaaggcatgcatcgagccttgcgcctcgacaaaaggctccttggatggttgt
gaagcaaaagcaggagccctcgccgaagcaagcagtcaatatttacccactgacagtcag
tacctgtctcccagtaagcaaccgagagacccttccttcctggcttctgagcagatggcg
agggtcttggcagatgtgcattcccgagcaagccgggattcctcggagatgggcactgtt
cttgagcagctggaccatcccaacagggatctgggcagagagtcggtggatgcagaagaa
gttgtgcgagaaattgataagcttttgcaggactgccggggaaatgaccctgtggctgtg
agaaagtga
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