Ochotona curzoniae (black-lipped pika): 121163726
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Entry
121163726 CDS
T11174
Name
(RefSeq) vacuolar protein-sorting-associated protein 36 isoform X1
KO
K12190
ESCRT-II complex subunit VPS36
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121163726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocz04131
]
121163726
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocz04147
]
121163726
Membrane trafficking [BR:
ocz04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
121163726
Exosome [BR:
ocz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121163726
Exosomal proteins of colorectal cancer cells
121163726
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
GRAM
MA3
BBL5
Xre-like-HTH
Motif
Other DBs
NCBI-GeneID:
121163726
NCBI-ProteinID:
XP_040847402
LinkDB
All DBs
Position
Unknown
AA seq
386 aa
AA seq
DB search
MDRFVWTSGLLEMNETLVIQQRGVRIYDGEEKIKFDAGTLLLSTHRLIWRDQKNHECCMA
IPLSQIVFIEEQAAGIGKSAKIVVHLHPAPSSKEPGPFQSSKNSYIKLSFKEHGQIEFHR
RLSEEMIQRRWETMPVSQSLQTGRGPQPGRIRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMIKAKEMVELSKSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETYGSGTQ
YHMQLAKQLAGILQAPLEERGGIMSLTEVYCLVNRARGMELLSPEDLVNACKMLESLKLP
LRLRVFDSGVMVIELQSHKEEEMLASALETVSEKGSLTSEEFAKLVGMSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLFMTQS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcttcgtgtggaccagcggcctcctggagatgaacgagaccctggtgatccag
cagcgcggcgtgcgcatttacgacggcgaggagaagataaaatttgatgctgggaccctc
cttcttagtacacatcgactgatttggagagatcagaaaaatcatgagtgctgcatggcc
attcctctttctcagattgtgttcattgaggaacaagcggctggcattgggaagagtgcc
aagatagtggttcatcttcacccagctccttccagcaaagaaccgggcccattccagagc
agcaagaactcctacatcaagctctccttcaaggagcatggtcagattgagtttcacagg
cgtttatcagaagaaatgatacagagaagatgggagactatgccggtttcccagtcgtta
cagacaggacgaggcccccagccaggaagaataagggcagtaggaattgtgggcattgaa
aggaaactggaagaaaaaagaaaagagactgacaaaaacatttctgaggcttttgaagac
ctcagcaagctaatgatcaaggctaaggaaatggtggagttatcaaaatcaattgctaat
aaaattaaagacaaacaaggtgacatcacagaagatgaaaccatcaggtttaaatcctat
ttactgagcatgggaatagctaacccagtgaccagggaaacttacggctccggcacacag
taccacatgcagctggctaaacagctggccgggatactgcaggcacctttggaggaacga
gggggaataatgtcactcacggaggtgtactgcttagtgaaccgggctcgaggaatggaa
ttgctgtcaccagaagatttagtgaatgcctgcaagatgctggaatcgctgaaattacct
ctcaggctccgagtttttgacagtggcgtcatggtcatcgagctccagtcccacaaggag
gaggaaatgctggcctcagccctggagacggtctcagaaaagggatccctcacctcagaa
gagtttgctaagctcgtggggatgtctgtgctcctggccaaggaaaggttgctgcttgca
gaaaaaatgggccatctttgccgagatgactcagtggaaggcttgcgattttacccaaat
ttgttcatgactcagagctaa
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