Ochotona curzoniae (black-lipped pika): 121163729
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Entry
121163729 CDS
T11174
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1-like isoform X1
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocz04990
]
121163729
Domain-containing proteins not elsewhere classified [BR:
ocz04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
121163729
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THSD1_N
THSD1_D2
THSD1_D3
TSP_1
TSP1_spondin
TSP1_ADAMTS
TSP1_CCN
TSP1_CFP_C
Defensin_4
Motif
Other DBs
NCBI-GeneID:
121163729
NCBI-ProteinID:
XP_040847405
LinkDB
All DBs
Position
Unknown
AA seq
852 aa
AA seq
DB search
MKPMLQDFSNLLLVVLCDYVLGEAEYLFLREPGHVALSNSTVSVDFRYFDEGNGTLRNVS
VLLWEASTNQTVTTKSLLTNQSQGTLEFECFCFKEAGDYWFLTMAPEVTDNSTPFPWWER
GALLKVEWPIFHIDLNRTSWAAEGTFQVGFSTSQPLCPFPVDQPNVLVDVTFANSLPETR
TGPGQPLEIKTSKRTGLAQGQWVEFGCAPVGPEAYVTVVLKLLGRDSVMATTGPIDLAQK
FGYNLVMAPELTCESVVEVMVLPPPCIFVQGVMAVFKEAPRRPGEGTVQLAQNSLPLGER
RTAFNCTLFDVGKNKYCFEFGASRKSQLSAKEKECMLIQRNIETWGLWQPWSQCSTTCGD
GVRERRRVCLTSFPSRPGCPGPSLETSLCSLEECAALRPSSSSPLQPQGPVKSNNVVTVT
GISLCMFIIVATVLITLWRRFGRPAKCSTPARHNSLRSAGFRKNSDEENICELSETRGSF
SDGGDGHAGSPGDMGIPLTYRRSVPASPEDDASGSESFQSNAQKIIPPLFSYRLAQQQLK
EMKKKGLTETTKVYHVSQSPLTDTAVEAAAGTPLDLESPEEAAANKFRIKSPFAEQPAVS
TGERPPSRLDRGVSQTACAISPSQTLIRKSQIRHVGVRGPPADRSHPRNSHFRRTASFHE
AKQARPFRERSMSTLTPRQVPSAYGSRMRPWDQAEDRSRPQSRGAHPLPEKQDALQGAGG
SSGPLSPLPKCYAMGQPSRKPELGDHRQTGVERTEPHRARRGPSPSHRSLSRKQSSPTRP
RDGYQRVSPLSPSQCRKDKCQSFPTQPEFAFYDNTSFGLTEAEQRMLDLPGYFGSNEEDE
TTSTLSVEKLVI
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaatgttgcaagatttttccaatctgctgttggtggtgctctgtgactacgtt
cttggtgaagctgaatatctcttcttgagagaaccaggccatgtagccctgagcaacagc
acggtgtctgtggatttccggtactttgatgagggtaatggcaccctaaggaatgtgtct
gtcctgctttgggaagccagcaccaatcagactgttactaccaagtccctcctgaccaac
cagtcccagggaacgctggagtttgaatgcttctgcttcaaggaggctggtgactactgg
ttcctgacaatggctccagaagtgacagacaacagcactcccttcccgtggtgggagaga
ggtgccttgctgaaggtggagtggcccatctttcacattgacttaaacaggacatcctgg
gcagcagaaggcaccttccaggtgggcttctctaccagtcagcccctgtgcccctttcct
gtggaccagcccaatgtcttggtggatgtaaccttcgccaatagccttcctgagacaaga
acgggtcccggacagccactggagataaaaaccagcaaaaggacgggactcgcacagggc
cagtgggttgagtttggctgtgcaccagtggggccagaagcatatgttaccgtggtgctg
aaactgcttggcagggactcggtcatggccaccacagggcccattgacctggcccagaag
tttggatacaacctagtcatggcgccagaactcacatgcgagtctgtggtggaggtcatg
gtgctgccgccaccgtgcatctttgtccaaggagtgatggctgtgttcaaggaggccccc
aggcgcccaggggaggggaccgtccagctggctcagaacagcctgccactgggagagagg
agaaccgcgttcaattgcacgttgtttgatgtggggaaaaacaaatactgctttgagttt
ggcgcatcaagaaaaagccagctttctgcaaaggaaaaggagtgcatgctcattcagaga
aatatagagacttggggactgtggcagccatggagccagtgtagcaccacatgtggggat
ggtgtcagagagcgtcgtcgggtgtgtctcacctccttcccctccagacccggctgtcct
ggaccgtccttggagacttctctgtgctccctggaggagtgtgctgcgctccggccttcc
agctcatctcctcttcagccccagggtccagtgaagtctaacaacgtggtgaccgtcacg
ggcatctcgctatgcatgttcatcattgtggccaccgtgctcatcacgctgtggaggaga
ttcggccgcccggccaagtgcagcacccctgcccgacacaactccctccgctctgctggc
ttccggaagaattcggacgaagagaacatctgcgagttaagcgagacacggggcagcttc
tcggatgggggcgatgggcacgcggggagccctggtgacatgggtatccccctgacctac
cggcgcagcgtgcccgcatctcccgaggatgacgcctctggcagcgagagcttccaatcc
aacgcccagaagatcatcccgcctctgtttagttaccgtctggcccagcagcagttgaag
gagatgaagaagaaagggctgacagagaccaccaaagtgtaccatgtatctcagagtccc
ttgacggacacggctgttgaggctgctgctggcacccccttagacttagaaagcccggaa
gaagctgctgccaacaagttccgcatcaaatccccctttgctgagcagcctgcggtcagt
actggggagagacctccctccaggctggatcgaggcgtgtcccagaccgcttgtgccata
agccccagccagaccttgatccgcaagtcccagatcaggcatgtgggtgtcagagggcca
cccgcagacaggagccatcccaggaattctcacttccgaaggacagctagttttcacgaa
gccaagcaggcccggccgttcagggagaggagcatgtccacgctcaccccacgccaggtc
cccagtgcctacggttctaggatgcggccctgggaccaggcagaggacagatcccggcct
cagagtcgaggggcccacccacttcctgagaaacaggatgctctgcaaggtgcaggaggc
agcagtggccccttaagtccacttcctaaatgctatgccatgggccagccttcaaggaaa
ccagagctgggtgaccaccgccagacaggggttgagagaacagagccacacagggcccgg
agaggaccatcccccagtcacaggagtctctcaaggaagcagtcctcccccacccgcccc
agagatggctaccagagggtcagcccactgagcccttcacagtgcaggaaggacaagtgt
cagagcttcccaactcagcctgagtttgccttctatgacaacacatcctttggcctcacc
gaggctgagcagaggatgctggacctcccaggttactttggatccaacgaagaggatgaa
accaccagcacgttgagtgtggagaagctggtgatctag
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