Ochotona curzoniae (black-lipped pika): 121164182
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Entry
121164182 CDS
T11174
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121164182 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocz03021
]
121164182 (TAF5)
03036 Chromosome and associated proteins [BR:
ocz03036
]
121164182 (TAF5)
Transcription machinery [BR:
ocz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121164182 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
121164182 (TAF5)
Chromosome and associated proteins [BR:
ocz03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
121164182 (TAF5)
STAGA complex
121164182 (TAF5)
TFTC complex
121164182 (TAF5)
SAGA complex
121164182 (TAF5)
SLIK complex
121164182 (TAF5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
WD40_Gbeta
TFIID_NTD2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
Beta-prop_WDR75_1st
DSE1_N
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_Aladin
WDR90_beta-prop_4th
PAC11
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_IFT140_1st
CFAP251_N
Beta-prop_WDR41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
ASA1
Beta-prop_NOL10_N
WD_LRWD1
Tricorn_2nd
Beta-prop_DCAF12
RAB3GAP2_N
CDK5RAP3
Beta-prop_RIG_1st
eIF2A
Cytochrom_D1
Beta-prop_ACSF4
LisH_PAC1
ABM-like
PROPPIN
Motif
Other DBs
NCBI-GeneID:
121164182
NCBI-ProteinID:
XP_040848108
LinkDB
All DBs
Position
Unknown
AA seq
801 aa
AA seq
DB search
MAALAEEQTEVAVKLEAEGPPTLLPPQAGDGTSEGSVGLTNNGPNGGGGNVAAAASSSAG
GDGGTPKPAVAVSAAAPAGAAPVPAAAPDAGAPHDRQTLLAVLQFLRQSNLREAEEALRR
EARLLEEAGAGSGAPGEVDGAGAEAASALLSRVTASAPGPAAPDPPGTGASGATVVSGSA
SGPAAPGKVGIVAVEDQPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQ
LFYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETML
DFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGS
LAGEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPRKDSIGSKSKKQD
PNAPPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDV
TDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKI
LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY
YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLN
GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLR
FSRDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKST
PVVHLHFTRRNLVLAAGAYSP
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcggaggagcagacggaggtggcggtcaagctagaggctgagggaccg
ccgacgctactacctccgcaggcgggcgatggcacaagcgagggcagcgtcggccttacc
aacaacggccccaatggcggtggcgggaacgtggcggcggcggcatcgtcgtcggccggc
ggggatggcgggacccctaagcccgcggtggctgtctccgctgctgccccggcgggggcg
gccccggttcccgccgctgccccagacgccggcgctccccacgaccgacagactctgttg
gcggtgctgcagtttctacggcagagcaacctccgcgaggcggaagaggcgctgcgccgc
gaggcccggctgctggaggaggcaggagcgggctccggagccccgggagaggtggatggc
gcgggcgccgaggcggctagcgcgcttctcagccgggtcaccgcctcggcccccggcccc
gcggccccagaccctccgggcaccggcgcttcgggggcgacggttgtctcgggctcagcc
tcaggtcctgcggctccggggaaagttggaattgtagctgtggaagaccagccagatgtc
agtgctgtgttatcagcctacaaccaacaaggagatcccacaatgtatgaagagtactat
agtggactcaaacacttcattgaatgttccctggactgccatcgggcagaattatcccag
ctcttttatcccctgtttgtgcacatgtatttggagctagtctacaatcaacacgagaat
gaagccaaatcattctttgaaaagttccatggagatcaggaatgttattaccaggatgac
ctacgagtattatctagtcttaccaaaaaggaacacatgaaagggaatgagaccatgttg
gattttcgaacaagtaaatttgttctgcgtatttcccgtgactcgtaccaactcttgaag
aggcatcttcaggagaaacagaacaatcagatatggaacatagttcaggagcacctctac
attgacatctttgatgggatgccgcgtagtaagcagcagatagatgcgatggtgggaagt
ttggcaggagaggctaaacgagaggcaaacaaatcaaaggtattttttggtttattaaaa
gaaccagaaattgaggtacctttggatgatgaggatgaagagggagaaaatgaagaagga
aaacctaaaaagaaaaagcctagaaaagatagtatcggatccaaaagtaaaaagcaagat
cccaacgctccacctcagaacagaatccctcttcctgagttgaaagactcagataagttg
gataagataatgaatatgaaagaaaccaccaaacgagtacgccttgggccagactgctta
ccctccatttgtttctatacattcctcaatgcttaccagggcctcactgcagtggatgtc
actgatgattctagtctcattgctggaggttttgcagattccactgtcagagtatggtct
gtgacacccaaaaagcttcgcagtgtcaagcaagcatctgatcttagcctcatagacaaa
gaatcggatgatgtcttagaaagaatcatggatgagaaaacagcaagtgagttgaagatt
ctgtatggtcacagtgggcctgtctatggagccagcttcagcccagataggaactatctg
ctttcttcttcagaggatggaactgtcagattgtggagccttcaaacatttacttgctta
gtaggatataaaggacacaactacccagtatgggacacacagttttctccctatggatac
tattttgtgtcagggggccacgaccgtgtagctcggctgtgggctacagatcactatcaa
cctctaaggatatttgctggccatctagccgatgtgaactgcaccagattccatccaaat
tctaattatgttgctacgggctctgcagacagaactgtacggctctgggacgtcttaaat
ggtaactgtgtaagaatcttcactggacacaagggaccaattcattccttgacattttct
cccaatgggagattcctggctacaggagcaacagatggcagagtactcctttgggatatt
ggacatggcttgatggttggagaattaaaaggccacactgatacagtctgctcacttagg
ttcagtagagatggcgaaattttggcatcaggttcaatggacaatacagttcggttatgg
gatgctatcaaagcatttgaagatttagagactgatgactttactacagccactgggcat
ataaacttacctgagaattcacaggagttactgctaggaacatatatgaccaaatcaaca
ccagttgtgcacctccattttactagaagaaacctggttctagctgcaggagcttacagt
ccataa
DBGET
integrated database retrieval system
