Ochotona curzoniae (black-lipped pika): 121164194
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Entry
121164194 CDS
T11174
Symbol
TRIM8
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM8 isoform X1
KO
K12001
tripartite motif-containing protein 8 [EC:
2.3.2.27
]
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocz04121
]
121164194 (TRIM8)
Enzymes [BR:
ocz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121164194 (TRIM8)
Ubiquitin system [BR:
ocz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121164194 (TRIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRIM_CC
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-B_box
zf-RING_10
zf-RING_5
CASP_C
zf-Nse
dCache_2
FliD_C
Motif
Other DBs
NCBI-GeneID:
121164194
NCBI-ProteinID:
XP_040848132
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MAENWKNCFEEELICPICLHVFVEPVQLPCKHNFCRGCIGEAWAKDSGLVRCPECNQAYN
QKPGLEKNLKLTNIVEKFNALHVEKPPAALHCVFCRRGPPLPAQKVCLRCEAPCCQSHVQ
THLQQPSTARGHLLVEADDVRAWSCPQHNAYRLYHCEAEQVAVCQYCCYYSGAHQGHSVC
DVEIRRNEIRKMLMKQQDRLEEREQDIEDQLYKLESDKRLVEEKVSQLKEEVRMQYEKLH
QLLDEDLRQTVEVLDKAQAKFCSENAAQALHLGERMQEAKKLLGSLQLLFDKTEDVSFMK
NTKSVKILMDRTQTCTGSSLSPPKIGHLNSKLFLNEVAKKEKQLRKMLEGPFSTPVPFLQ
SVPLYPCGVNSSGAEKRKHSTAFPEASFLETSPGPVGSQYGAAGTASGEGQSGQPLGPCS
STQHLVALPGGAQPVHSSPVFPPSQYPNGSAAQQPMLPQYGGRKILVCSVDNCYCSSVAN
HGGHQPYPRSGHFPWTVPSQEYSHPLPPAPSVPQSLPGLAVRDWLDASQQPGHQDFYRVY
GQPSTKHYVTS
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaattggaagaactgcttcgaggaggagctcatctgccccatctgcctgcac
gtcttcgtggaaccggtgcagctgccatgcaaacacaacttctgccggggctgcatcggc
gaggcgtgggccaaggacagcggcctagtgcgctgcccggagtgcaaccaggcctacaac
cagaagccgggcctggagaagaacctaaagctcaccaacatcgtggagaagttcaacgcc
ctgcacgtggagaagcccccggcggcgctgcactgcgtgttctgccgccgcggccccccg
ctgcccgcgcagaaggtctgcctgcgctgcgaggcgccctgctgccagtcccacgtgcag
acgcacctgcagcagccctccaccgcccgcgggcacctcctggtggaggcggacgacgtg
cgggcctggagctgcccgcagcacaacgcctaccgcctctaccactgcgaggccgagcag
gtggccgtgtgccagtactgctgctactacagcggcgcgcatcagggacactcagtgtgc
gacgtggagatccggaggaatgagatacggaagatgctgatgaagcagcaagaccggctg
gaagagcgagagcaggacattgaagatcagctgtacaagcttgaatcagacaaacgcttg
gtggaggagaaggtgagccaactgaaagaggaagtgcgtatgcagtatgagaagctgcac
cagctgctggacgaagacctgcggcagacagtggaggtcctggacaaggcccaggccaag
ttctgcagtgagaacgcggcgcaggcgctgcaccttggagagcgcatgcaagaggccaag
aagctgttgggttccctgcagctgctcttcgataagacagaggatgtcagcttcatgaag
aacaccaagtctgtgaaaatcctaatggacaggacccagacctgcacgggcagcagcctt
tccccccctaagatcggccacctgaactccaagctgttcctgaacgaggtggctaagaag
gagaagcagctgcggaagatgctagaaggacccttcagcacgccggtgcccttcctgcag
agtgttcccctgtacccgtgcggtgtgaacagctctggggcggagaagcgcaagcattcg
acggctttccctgaagccagtttcctggaaacatcgccaggccctgtgggcagccagtat
ggggcagcaggcacagccagcggcgaaggccaatctgggcagcccctgggcccctgcagc
tccacacaacacctggtggccctgccaggcggtgcccagccagtgcactcaagccctgtg
ttccccccatcacagtacccaaatggctctgctgcccagcagcccatgctcccccagtat
ggcggccgcaagattctcgtctgttctgtggacaactgttactgttcttccgtggccaac
catggcggccaccagccctacccccgctccggccatttcccctggacagtgccctcgcag
gagtattcgcacccactcccacctgcaccctccgtgccccagtcccttcccggtctggcg
gtcagagactggcttgacgcctcccagcagcccggccaccaggatttctacagggtgtat
gggcagccgtctaccaaacactacgtgacaagctaa
DBGET
integrated database retrieval system
