Ochotona curzoniae (black-lipped pika): 121164225
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Entry
121164225 CDS
T11174
Symbol
POLL
Name
(RefSeq) DNA polymerase lambda
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03410
Base excision repair
ocz03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121164225 (POLL)
03450 Non-homologous end-joining
121164225 (POLL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocz03400
]
121164225 (POLL)
Enzymes [BR:
ocz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
121164225 (POLL)
DNA repair and recombination proteins [BR:
ocz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
121164225 (POLL)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
121164225 (POLL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
NTP_transf_2
BRCT
Motif
Other DBs
NCBI-GeneID:
121164225
NCBI-ProteinID:
XP_040848210
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MDSGGILKAFPKRKKIHSNSSSKALVKIPKREEGTAAAGEWLHPLRVHVVPTGIGRARAE
LFEKQIVQHGGQVCPAQAPGITHIVVDEDMDYERALRLLRLPRLPTGAQLVRYLDQAPAS
KADQDSSTPPSTHRALPETVLSPPPPPTRPVSPPQKAEKAPSTQATQPVSDDEASDGEEP
QVSEADLEALITGHYPSHPEGDAEPGPAPEALGKWVCAQPSSQKATNHNSHVTEKLQVLA
KAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKVVEILESGHLRK
LDHISESVPILELFSNIWGAGSKTAQMWYQQGFRSLEDIRSQASLTAQQAIGLKHYDDFL
ERMPREEAAEIEQTVREAAQAFNPGLLCVACGSYRRGKATCGDVDVLITHPDGRAHQGIF
SRLLDSLRQQGFLTDDLVSQEENGLQQKYLGVCRLPGPGRRHRRLDIIVVPYSEFACALL
YFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNSQGVKVAPGQMLPTPTEKDVFRLLG
LPYREPAERDW
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggactccgggggcatcttgaaggcatttcccaagcggaagaaaattcattccaattca
tcatcaaaagccttggtgaagattcccaaaagagaagaaggcacagcagcagcaggagag
tggctccatcccctgcgggtccatgttgtgcccaccggcattggacgagcccgcgcagag
ctctttgagaagcagattgttcagcatggtggacaggtgtgtcctgctcaggccccgggc
atcacgcacatcgtggtggatgaggacatggactacgagcgggccctccgcctcctgagg
ctgccccgactgcccacgggagctcagctggtgagatacctggaccaagcaccagccagc
aaggcagatcaagactcatcgactccccctagcacccacagggctctgcctgagacagtg
ctctctcctccccctcctcccaccagacccgtatctccgccccaaaaagcagagaaagca
ccaagcactcaagccacccagcctgtctctgatgacgaagccagtgatggggaggagccc
caggttagcgaagctgatctggaagccctgatcaccggccactaccccagccacccggag
ggagatgcggagcctggcccagccccagaggccctggggaagtgggtctgtgcccagccc
tccagccagaaggcaaccaaccacaactcccatgtcacagagaaactgcaagtgttggcc
aaagcctatagtgtccaaggggacaaatggcgggctctgggctatgccaaagccatcaac
gccctcaagagcttccacaagcctgtcacctcctatcaggaagcctgcagtatccctggg
atcgggaagcggatggctgaaaaggtcgtagagatcctggagagtggccacctgcggaag
ctggatcacatcagtgagagcgtgcccatcctggagctcttctccaacatctggggggcc
ggaagcaagactgcccagatgtggtaccaacagggtttccggagcctggaagatatccgc
agccaggcttccctgactgcccagcaggccattggcctgaagcattacgacgacttctta
gaacgcatgcccagggaagaggccgcagagatcgagcagacggtccgggaagctgcacaa
gccttcaaccccgggctgctgtgtgtggcatgcggctcgtaccggcgaggcaaggccacc
tgtggggacgtagacgttctcatcactcaccccgacggtcgggcccaccagggcatcttt
agtcgcctccttgacagccttcggcagcaagggttcctcacagatgacctggtgagccaa
gaagaaaatggactgcaacagaagtacctgggtgtgtgtcggctcccgggccctgggcgg
cggcaccgaaggctggacatcatcgtggtaccctacagtgagtttgcctgtgccctgctc
tacttcaccggctctgcccacttcaaccggtccatgcgagccttggccaaaaccaagggc
atgagcttgtcagagcatgccctcagcacagctgtggtccggaacagccaaggtgtcaag
gtggcacctggccagatgcttcccactcccacagagaaggatgtcttcagactcttaggg
ctgccttaccgagaaccagctgagcgggactggtga
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