Ochotona curzoniae (black-lipped pika): 121164271
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Entry
121164271 CDS
T11174
Symbol
MMS19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocz03036
]
121164271 (MMS19)
03400 DNA repair and recombination proteins [BR:
ocz03400
]
121164271 (MMS19)
Chromosome and associated proteins [BR:
ocz03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121164271 (MMS19)
DNA repair and recombination proteins [BR:
ocz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
121164271 (MMS19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
PDS5
HEAT_2
HEAT
Sec7-like_HUS
INTS7_N
Motif
Other DBs
NCBI-GeneID:
121164271
NCBI-ProteinID:
XP_040848291
LinkDB
All DBs
Position
Unknown
AA seq
1071 aa
AA seq
DB search
MAAVAALEAAAPPGALWGLVQDFVMGQQEGPAAQVAADVKSGSYTVLQVVEALGSSLENP
EPRTRARGIQLLSQVLLQCHSLLLEKEGTSIASGGVLDCCTKAPCVRTQMGSRTKVPIWD
ASACRWKIMVHLVLFYENRLKDHHLVIPSVLQGLRALSLCMTLPSGLAVSVLKAIFQEVH
VQSLPQVDRHTVYTIITNFMQIREEELKGLGADFTFGFIQVMDGEKDPRNLLVAFRIVHD
LISRDYSLGPFVEELFEVTSCYFPVDFTPPPNDPHGIQREDLILSLRAVLASTSRFAEFL
LPLLIEKVDSEILSAKLDSLQTLNACCAVYGQKELKDFLPSLWASIRREVFQTASERVEA
EGLAALHSLTACLSRSVLRADAEDLLDSFLSNILQDCRHHLCEPDMKLVWPSAKLLQAAA
GASARACDHITSNTLPLLLEQFHKHNQSNQRRTILEMILGFLKLQQKWSYEDKDERPLNA
LKDQLCSLVFLALSEPSTQLQLVGIRTLTVLGAQPGLLSSEDLELAVGHLYRLSFLEEDF
QSCRAAALEASGTLATLYPVAFSSHLLPKLAEELCTGESDVAQQDGPTKCCRHLHCLQAL
SAISTHPSLVRETLPLLLQHLGQMNKGNMVAGSNEVIAICQSLQQVAEKCQQDPESCWYF
HQTAIPCLLALAVQASMPENEPSVLSKVLLEDEVLVAMVSVIGTATTHLNPELAAQSVTC
IVPLFLDGNTSFLPENSFPSKFQPFQDGCPEQRRLVALLMAFVCSLPREVEIPQLNQLMR
ELLELSCCPGCPFSSTAAAKCFAGLLNKHPAGQQLDEFLQLAVDTVEASLGSGPSRKEAF
TLLLWVTKALVLRYHPLSSCLTTRLMGLLSDPELGPAAADGFSLLMSDCTDVLTRAGHAE
VRIMFRQRFFTDNVPALVQGFHAAIQDVKPNYLKGLSHVLNRLPKPVLLPELPTLLSLLL
EALSCPDCVVQLSTLSCLQPLLLEAPQVMSLHVDTLVTKFLDLSSSPSMAVRIAALQCMH
ALTRLPTSVLLPYKPQVIRALAKPLDDKKRLVRKEAVAARGEWFLLGSPGS
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgtcgccgctctggaggcggcggcgcctccgggcgccctatggggcctcgtg
caagacttcgtcatgggtcagcaggagggccccgctgcccaggtggctgcagatgtgaaa
tctggcagctatacagtgttacaagttgtggaagcccttgggtcctctctagagaaccca
gaacccagaactcgggctcgaggaatccagcttttgtcacaggtgctgctgcagtgtcac
tccctgctgctggagaaggaaggtactagcattgctagtggtggtgtcctggattgttgc
accaaggccccctgtgtccggacccagatgggaagtagaacaaaagtgcccatatgggat
gccagtgcttgcaggtggaagattatggtgcacctggtcctgttctatgagaaccgcctg
aaagaccatcaccttgtgatcccatctgtcctgcaaggtttgagggcacttagcctgtgt
atgactctgccctccgggctggctgtctctgtgcttaaagccatcttccaggaggtacac
gtgcagtccttgccacaggtggaccgacacacagtctacactatcattaccaacttcatg
caaatccgggaagaagagctaaaaggccttggagctgacttcacctttggcttcatccag
gtgatggatggggagaaggacccccgtaatcttctggtagccttccgcatcgtccatgac
ctcatctccagggattatagcctgggaccctttgtggaggagttgtttgaagtgacatct
tgctacttccctgttgattttacccctccacctaatgatcctcatggtatccagcgagaa
gatctcatcctgagccttcgagctgtgctggcatctacatcaaggttcgctgagttcctg
ctgcccctgctgattgagaaggtggattctgagattctgagtgccaagctggattctttg
cagactctgaatgcttgctgtgctgtgtatggacagaaggagctgaaggacttcctcccc
agcctttgggcttctatccgcagagaggtgttccagacggccagtgagcgggtggaggcc
gagggcctggcggccctccactccctgactgcgtgtttgtctcgctctgtgctgagggct
gatgctgaggacctccttgactccttccttagcaacatcctacaggactgcaggcaccac
ctctgtgaaccggacatgaaattggtgtggcccagtgccaaactgttgcaggcagctgca
ggtgcatctgcccgggcctgtgaccacatcaccagcaacacactgcctttactgctggaa
cagttccacaagcacaaccagagcaaccagcggcggacaatccttgaaatgatcctgggt
ttcctgaagctgcagcagaagtggagctatgaagacaaagatgaaaggcctctgaatgct
ctcaaggaccagctgtgctccctggtgttcctggccctgtcagagcccagcactcagctc
cagcttgttggcatccgtacactcacggtgttgggtgcccagccaggtctgttatcttct
gaggacttggaactggcggtgggtcacctatacagactgagcttcctggaggaggatttc
cagagctgcagggcggcagcactggaagcatcaggcactctagccacactctaccctgtg
gccttcagcagccacttactgcccaagcttgctgaggagctgtgtacaggagagtcagac
gtggctcaacaggatgggcccaccaaatgctgccggcatctgcactgtctgcaagctctg
tctgctatttcaacacatcccagtcttgtcagggagacactacctctgctgctgcagcac
cttggccagatgaacaaaggaaatatggtagcaggatctaatgaagttattgccatctgt
cagagcctccagcaggtggcagaaaaatgccagcaggaccctgagagttgttggtatttc
caccagacagccatcccttgcctgcttgctctggctgtgcaagcttccatgccagagaac
gagccctctgttctgagcaaagtgctactggaggatgaggttttggtcgccatggtgtcc
gtcatcggcactgccaccacccatctgaaccctgagttagctgcccagagtgtcacctgc
attgtgcccctcttcttggatggcaacacctcctttctgccggagaatagcttcccaagc
aaattccagccattccaggatggctgcccagagcagaggcggctggttgcattgcttatg
gcctttgtctgctccctgcctcgagaggtggaaattcctcaactgaaccaactcatgcgg
gagctgttggaactgagctgctgtccaggctgccccttctcctccacagctgctgccaag
tgctttgcaggactcctcaacaagcaccctgcagggcagcagttggatgaattcctccag
ctggctgtggacacggtagaagcgagcctgggctccgggccatctcgtaaggaggccttc
acactgctgctgtgggtaacaaaggcacttgtgctaaggtatcatcctctcagctcctgc
cttacaacccggctcatgggccttctgagtgatccagaactaggcccagcagcagctgat
ggcttttctctgctcatgtctgactgcactgacgtgttgactcgcgctggccatgctgaa
gtccggatcatgttccgccagcggttcttcacagacaatgtgcctgctttagtccagggt
ttccatgctgctatccaagatgtgaagccaaactacctgaagggcttgtcccatgtcctt
aacaggctgcccaagcctgtgctcttgccagagctgcccacactcctctctttgctgttg
gaggccctgtcctgccccgactgtgtggtccagctctccaccctcagctgccttcagcct
cttctgctggaagcccctcaggtcatgagtcttcatgttgacacccttgtcaccaagttt
ctggacctcagctccagtccttccatggctgtccggattgctgctttgcagtgcatgcat
gctctgacgcgtctgcccacgtcggtgttgctgccctacaaaccacaggtgatccgagcc
ttagccaaaccgctagatgataagaagagactggtgcgcaaagaggctgtggcagccagg
ggagaatggttcctgctagggagtcctggcagctga
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