Ochotona curzoniae (black-lipped pika): 121164676
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Entry
121164676 CDS
T11174
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocz03021
]
121164676 (TAF1B)
Transcription machinery [BR:
ocz03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
121164676 (TAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
CoV_NSP2_N
Zn_ribbon_NOB1
Motif
Other DBs
NCBI-GeneID:
121164676
NCBI-ProteinID:
XP_040848748
LinkDB
All DBs
Position
Unknown
AA seq
587 aa
AA seq
DB search
MELEEAKEFKERCTQCDAVSWGLTDEGRYYCTSCHNVTERSKEVLNTEAIPNTKIKAINR
GLKRKSKLEKGWDWYVCEGFQHILCQQAEALKTLGVSLELKNEVLHNFWKRYLQKSKQAY
CKNPVYTSGRRVTALEDHLGHSDWTSDPELLSDTNCTFVGSGAESQSEIPGRKPSHSAKA
SHSEAASVCSGSLDGVEYSQRKDKGIVKMTVPRTLAFCCLSLLWQREAITLSDLLRFVEE
DHIPYINAFQHFPEEMKLYGRDKGIFAVESWPDYEDIYQKMIEMAIFLDLPRFPDITEDC
FLHPNILCMKYLMEVNLPDEMHALTCQVVKVTGIGEVDFLTFDPIAKMAKTVRYDVQAMA
VIVVALKLLFLLDDNVEWSLSDLAEDYNEDHQDKPWFDFRKWYQVMKKAVDEKKQKREEA
RAKYLWKSERPLYHSHIDKPVVYKRREMVVSLQKQFSALVDPTPTPGGKKPSSFQFNWTE
EDTNRTCFHGHSLQGVLSKKGQSLLIKNSLYWLSTQKFCRSYCRHVTTYEETNFSLSYRF
VLNLFSFLLRIKSSLLHEEVSLIEKKLFKRKYIKPNQPARSKRVRRR
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggagctggaggaggcgaaagaatttaaggaacgctgcacgcagtgtgacgctgtctcc
tggggcctcacggatgaaggcagatactactgtacgtcttgccacaatgtcacagaaagg
tccaaggaggtactgaacactgaagccatccccaataccaagatcaaagctatcaaccgg
gggcttaaaagaaaaagcaagctggaaaaaggctgggattggtatgtgtgcgaaggattc
cagcacatcctgtgtcagcaggcagaagctctgaagaccttaggcgtcagcctggagctc
aagaatgaagttttacataatttctggaagcgctaccttcagaagagcaagcaggcatat
tgtaaaaacccagtttacaccagtggaaggagagttacagcactagaagaccatctaggt
cattcagactggaccagtgaccctgagctgctgagtgacactaactgtacttttgttgga
agtggggccgagtctcagtctgagatcccaggtcggaagccttcgcacagtgccaaagca
tcacactcagaagcagcttctgtctgttcgggctctctggacggggttgaatactcgcag
cgcaaggacaaggggatcgtgaagatgaccgtaccccggacactcgccttctgctgcctg
tccctgctctggcagagagaggccattactctttcagacctgttgagatttgttgaagag
gaccatattccttatataaatgcttttcagcattttccagaagagatgaaattgtatggg
cgggacaagggcatctttgctgtagagtcctggcctgactatgaagatatctatcaaaaa
atgatcgaaatggccatatttttagatttgcctcgttttccggacattactgaagactgc
ttcctccaccccaacatcttgtgtatgaaatacttgatggaggtcaacctccccgatgaa
atgcatgctttaacctgtcaagtggtaaaggtgactggcataggagaagtggattttttg
acatttgatcctattgctaaaatggcaaaaaccgtgagatatgacgtgcaggctatggct
gtcattgtagtggcattgaagctgctctttttgttggatgacaatgtagaatggtctttg
tctgatcttgctgaagactacaatgaagaccaccaagataagccatggtttgatttcaga
aagtggtaccaagttatgaagaaagctgttgacgagaaaaaacaaaaacgggaagaagca
agggcaaagtacctgtggaaaagtgaaagaccactctaccactcgcacattgacaagccg
gtggtgtacaagagaagagaaatggttgtgagtctccagaaacagttcagtgcgctggtt
gatccaacaccaactcctggggggaaaaaaccttcaagctttcagttcaactggactgaa
gaagataccaataggacgtgtttccatggacacagcctccagggggtcctgagcaagaaa
ggccagtcgctgctcatcaagaactccttgtactggctcagtacacagaagttctgcaga
agctattgcagacatgtgacaacctacgaagaaacgaatttttccctgagttaccggttt
gtactgaatctcttctccttcctgctgagaataaagagctccttactccatgaagaagtg
agcttaattgaaaagaaactttttaaaaggaaatacattaaaccaaaccaacctgcaaga
tccaaaagagtgagaagacgttaa
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