Ochotona curzoniae (black-lipped pika): 121164699
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Entry
121164699 CDS
T11174
Symbol
GEN1
Name
(RefSeq) LOW QUALITY PROTEIN: flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocz03400
]
121164699 (GEN1)
DNA repair and recombination proteins [BR:
ocz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121164699 (GEN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Chromo_SEND1
SpoU_methylas_C
Motif
Other DBs
NCBI-GeneID:
121164699
NCBI-ProteinID:
XP_040848793
LinkDB
All DBs
Position
Unknown
AA seq
907 aa
AA seq
DB search
MGVNDLWQILEPVKEHVDLKDLAGKTIAVDLSLWVCEAQAVKKMKGTVPKPHLRNLFFRI
SYLTQMDIKLVFVMEGEPPRLKADVINKRNQIRYGPSGKTSQKTERSHFKLVLQECLDLL
KCLGVPWVQAAGEAEAMCAHLNAEGQVDGCFTNDGDAFLYGAQTVYRNFTMNAKDPHVDC
YTMTSIRNNLGLDRDTLIGLAILLGCDYLPEGVPGVGKEKALKLIQSLKGQNLLQRFNQW
NEKSSHTSPQAAVTRKPAHCSLCSHPGSRNAHERNGCKLCKSSKYCEPHGDEYCCPCEWH
QTEHHSQPAGIEESIKKKACQCEGFPFQEVIEEFQSNRDSLAKEILYHRPDLLLFQKFAH
EKMQWSSHYACKKLLELLTRYDMVERKLGRRNSNQLQPIRIVKNRIRRGVHCFEIAWEKP
EHYVTKDGQKGDSVVSTVEEESLFEAAYPEIVAVYKLQKLEIKGKPKKGMKIKPRNNNLP
DSDDAVSVQSQLTLKPAREIFPKQNSELNLEIPPIPALSQEASSASLNNLLLPEDNSCLN
THEQFISSPRLLAIQQKNKAATEYPTSEAGQHNSLNNNRSVIADLHLSTIDWEGTSFSNS
PAIQRNTVSCDLKSTLTAELSATTDSYENIQEQLCESEQFASNMNEASDWDLQKISSEEH
LISSISNLCLKDLPLRERLLIKSSFPQNNVQPDVDLKTVSLIRRKESCVARNSFDYPPQL
SQDLPGIHLQNESRNSEMLKDQLLQENCEITSSAPLSDKNPTAFRAGPPNITSDHNRKFD
MPAMKKAVMQRSVCLERQSSDDESTPVFERAKFSTNKIKHGFQNNLTAKFKENDHNNLPN
PKLLMKETEKYNKSFKRSRNEEDSSSGPGKKLPSSPQCHQKGDHDSSVRLDSPPPLAQRL
KLKFQNT
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgaatgacctgtggcaaattctagagcctgttaaggaacacgtggacctaaag
gatcttgctgggaaaaccattgcagttgatctgagcctctgggtgtgtgaagcacaggca
gtcaaaaaaatgaagggaactgtgccgaagccccacctcagaaacctgttttttcgtatc
tcctatttaacacaaatggatataaagttagtgtttgttatggaaggagagccaccaagg
ctaaaagctgatgtcataaacaagaggaatcaaattcggtacggaccttctggtaaaacg
tctcagaaaacagagagatcccattttaagctggttttacaagagtgtctggatctgctg
aagtgcttaggagtgccctgggttcaggcggccggggaagcggaagccatgtgcgcccac
ctcaacgcagagggccaggtggacggctgcttcaccaacgacggagacgccttcctctat
ggggcccagactgtttacaggaatttcactatgaatgcaaaggacccacacgtggattgt
tataccatgacgtctatcaggaataacctggggttggacagggacactctgattggactg
gcgattcttctcggctgtgattatctcccagagggagtccctggagttggaaaagaaaag
gcattaaaacttatacagagtttgaaaggacagaatttacttcagaggtttaatcagtgg
aatgaaaaatcatctcacaccagtccacaagcagcagtcactagaaaaccggctcattgt
tcactgtgttcccacccaggctcacgtaatgctcatgaacggaatggatgcaaattatgt
aaaagcagtaagtactgtgagccacatggtgatgaatactgctgtccttgtgagtggcat
cagacggaacatcacagccagcccgccggaatcgaggaaagtattaagaagaaagcgtgc
cagtgtgaaggattcccattccaagaggtcattgaagaattccaatcgaacagggatagc
ctggcgaaggagatcctctaccacaggcctgatttgctgctgtttcagaaatttgctcat
gaaaaaatgcagtggtccagtcactatgcatgtaagaaattgttggaactcttgactcgt
tatgacatggtagaaagaaagcttggcagacggaactctaatcaactacagccaattcga
attgttaaaaaccgaattagacgtggagttcattgctttgaaatagcatgggaaaagcct
gaacattacgttacaaaagatgggcaaaaaggagactcggttgtatcaacggtcgaagaa
gaatcattgtttgaagccgcatatccagagattgttgccgtttacaaattacagaagtta
gaaattaaagggaagccaaaaaagggtatgaaaattaagcccaggaacaataatttacca
gactcggatgatgcagtgagtgttcagtcgcaactgactttaaaacccgcacgtgaaatc
tttcctaaacagaattctgagctgaatttggaaattcctcccattcctgcattatcacag
gaagcaagctctgcctcattgaataacttacttttacctgaagacaattcttgtttgaat
acccacgaacagtttatatcctccccaagacttttggctatccagcaaaaaaacaaagct
gcaactgaatatccaacttcagaagccggtcaacacaattccttaaacaacaataggtca
gtaattgctgatctgcacttgagcaccattgactgggaaggcacttctttcagtaattcc
ccagctattcaaaggaacactgtctcttgtgatttaaagtcaacacttacagcagagctg
tcagccactactgattcttatgaaaatatccaagagcaattatgtgaatcagagcaattc
gcctcaaacatgaatgaagcgtcagattgggatctccaaaagattagttctgaagagcat
ctcatttctagcatttccaacttatgtctaaaggatttgcctttaagggaacgactactg
ataaagtcatcatttcctcagaataatgtacaaccagatgttgacctgaaaactgtatcc
ctaattaggagaaaagagtcttgtgtcgctaggaatagttttgactatccaccacaactt
tctcaggatcttccaggaatccatttgcaaaatgaatccagaaatagtgagatgttaaaa
gaccaactacttcaagaaaactgcgaaataacctcttctgcacctctttctgacaaaaat
ccaacagcatttagagctggaccaccaaatataacttcggatcacaatagaaaatttgat
atgccagccatgaagaaagctgtaatgcagagaagtgtttgccttgaaagacagtcatct
gatgacgaaagcaccccagtgtttgagagagctaagttctcaacaaacaaaataaagcat
ggttttcagaataatctcacagcaaaattcaaagaaaatgaccacaacaatttacctaat
cctaaactactgatgaaagaaactgaaaaatataacaaatctttcaaaagatctagaaat
gaagaagattcttcctctggcccaggaaaaaagctcccgagttctccccagtgtcatcag
aaaggagatcacgactccagtgttcggctggatagtccacctcctttagcgcagagatta
aaactcaagttccaaaacacttga
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