Ochotona curzoniae (black-lipped pika): 121165039
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Entry
121165039 CDS
T11174
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04517
IgSF CAM signaling
ocz04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121165039 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121165039 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocz04812
]
121165039 (SPTBN1)
Cytoskeleton proteins [BR:
ocz04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
121165039 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
121165039 (SPTBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
121165039
NCBI-ProteinID:
XP_040849399
LinkDB
All DBs
Position
Unknown
AA seq
2364 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIGIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKI
LSSDDYGKDLTSVMRLLSKHRAFEDEMSGRSGHFEQAIKEGEDMIAEEHFGSEKIRERIT
YIREQWANLEQLSAIRKKRLEEALLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIANYRPTIDSLHEQASALPQEHAESPDVRGRLSGMEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDRIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLDKIEKEGMQLISEKPETEAVVKEKLTGLHKMWEVLESTTQTKAQRLFDAN
KAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEIEELQ
SQAQALSQEGKSTDEVDSKRLTVQTKFMELLEPLNERKHNLLASKEIHQFNRDVEDEILW
VGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIVTDSSSLNA
EAIRQRLADLKQLWGQLIEETEKRHRRLEEAHRAQQYYFDAAEAEAWMSEQELYMMSEEK
AKDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVADSHPESERISMRQSKVDKLY
AGLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERF
REFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQI
LAASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQV
RQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMV
RDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLAR
KHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYL
SSREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRRP
PSPEPSTKVSEETESQQQWDTSKGEQVSQNGLPAEQGSPRMADAADMSDMVNGAAEQRTS
SKESSPIPSPTSDRKAKTSFSTQSAATLPARTQETPSAQMEGFLNRKHEWEAHNKKASSR
SWHNVYCVINNQEMGFYKDAKTAASGIPYHSELPVSLKEALCEVALDYKKKKHVFKLRLN
DGNEYLFQAKDDEEMNAWIQAISSAISSDKHEVSASTQSTPASSRAQTLPTSVVTITSES
SPGKREKDKEKDKEKRFSLFGKKK
NT seq
7095 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccacggtagccacagactacgacaacattgagatccagcagcagtacagcgac
gtcaacaaccgctgggacgtggatgactgggacaatgagaacagttccgcacgtctcttt
gagcgatcccgcattaaggctctggccgatgagcgtgaggccgtgcagaagaagaccttc
accaagtgggtcaactcccacctggcccgagtgtcctgccgcatcacagatctgtacact
gaccttcgggatggacggatgctcatcaagctgctggaagtcctctctggagagaggctg
ccaaaacccacgaagggccggatgcgcatccactgcctggagaacgtggacaaggctctg
cagttcctgaaggagcagagagtccatcttgaaaacatggggtcccacgacatcgtggat
gggaaccaccggctgaccctcggcctcatctggaccatcatcctgcgcttccagatccag
gatatcagtgtggaaactgaggacaacaaagagaaaaagtctgccaaggacgctttgctg
ttgtggtgccagatgaagacagctgggtaccccaacgtcaacattcataatttcaccact
agctggagggatggcatggccttcaatgcactgatacacaaacaccggcccgacctgata
gattttgacaaactgaagaaatccaatgcacactacaatcttcagaatgcatttaacctg
gcagagcagcacctgggcctcactaaattgttggaccctgaagatatcagcgtggaccac
cctgatgagaagtccatcatcacctatgtggtgacttactaccactacttctctaagatg
aaggccttggctgtggaaggaaaacggatcggaaaggtgcttgataatgctattgaaaca
gaaaaaatgattgagaagtatgaatcacttgcctctgacctcctggagtggattgaacaa
accatcattattctgaacaaccgcaaatttgccaactcactggtcggggtacagcagcag
ctccaggcattcaacacttaccgcacggtggagaaaccgcccaaatttactgagaagggg
aacctggaggtgctactcttcacgattcagagcaagatgagggccaacaaccagaaggtc
tacatgccccgggaggggaagctcatctctgacattaacaaggcctgggaaagactggaa
aaagcagaacacgaaagagaactggccctgcggaatgagctcatcagacaggagaaactg
gaacagctggcccgcagattcgatcgcaaggcagccatgcgggagacgtggctgagcgag
aaccagcgcctcgtgtcccaggacaactttggatttgaccttcctgccgttgaggccgcc
acgaaaaagcatgaagccattgagacagatattgccgcatacgaggagcgtgtgcaggcc
gtggtggctgtggccagggagctggaggctgagaactaccatgacatcaagcgcatcaca
gccaggaaggacaatgtcatccggctctgggaatacctgctggaactgctcagagcccgg
aggcaacgtctggagatgaacctggggctgcagaaaatattccaggaaatgctctacatt
atggactggatggatgaaatgaaggtgctattattatcccaagactatggcaagcacttg
cttggcgtggaagacctgttacagaagcatgccctggtggaggcggacatcggcatccag
gcagagcgcgtgagaggggtcaacgcctctgcccagaagtttgcaaccgatggagaaggt
tacaagccctgcgacccacaggtgatccgagaccgcgtagcccacatggagttctgctat
caagagctgtgccagttggcagccgagcgccgggcacgcctggaagagtcccgccgcctc
tggaagttcttctgggagatggcagaagaggaaggctggatacgagaaaaggagaagatt
ttatcttccgatgactacgggaaggacctgaccagcgtcatgcgcctcctcagtaagcat
cgggcatttgaggatgagatgagtggccgcagcggccactttgagcaggccatcaaggag
ggtgaagacatgatcgccgaggagcacttcgggtccgagaagatccgtgagaggatcaca
tacatccgggagcagtgggccaacctggagcagctgtcggccatccggaagaagcgcctg
gaggaggccttactgctgcaccagttccaggcggatgccgatgacatcgacgcctggatg
ctggacatcctcaagatcgtctccagcaatgacgtgggccacgacgagtactccacccag
tccctggtcaagaagcacaaggacgtggctgaagagattgccaactacaggcccaccatc
gactcgctgcacgagcaggccagcgctctcccccaggagcatgctgagtctccagacgtg
cggggcaggctctcaggcatggaggagcgctacaaggaggtggcggagctgacacggctg
aggaagcaggcactgcaggacaccctggccctgtacaagatgttcagtgaagctgatgcc
tgcgagctctggatcgatgagaaagagcagtggctcaacaacatgcagatcccagagaag
ctggaagacctggaggtcatccagcacagatttgagagcctagaaccagaaatgaacaac
caggcttcccgggttgcagtggtaaaccagattgcacgccagctgatgcacagtggccac
ccgagtgagaaggagatcaaagcccagcaagacaaactcaacacgaggtggagtcagttc
agagagctggttgacaggaagaaggatgccctgctgtccgccctgagcatccagaactac
caccttgagtgcaatgagaccaaatcctggattcgggaaaagaccaaggtcattgagtcc
acccaggacctgggcaatgacctggccggtgtcatggccttgcagcggaagctgacaggc
atggaacgggacttggtggccattgaggcaaagctgagcgacctgcagaaggaggcggag
aaactcgagtcagagcaccctgaccaggcccaggccatcctgtctcggctggccgagatc
agcgacgtgtgggaggagatgaagaccaccctgaagaaccgggaggcctccctgggagag
gccagcaaactgcagcagttcctgcgtgacctggatgacttccagtcctggctctccagg
acccagacggccatcgcctcggaagacatgcccaacaccttgaccgaggccgaaaagctg
ctcacccagcacgagaacatcaaaaatgagatcgacaactatgaggaggactaccagaag
atgagggacatgggcgagatggtcacccagggacagacagacgcccagtacatgtttcta
cggcagcggctgcaggccctggacactggatggaacgagctccacaaaatgtgggaaaac
cggcagaatctcctgtcccagtctcatgcctaccagcagttccttagggacacaaagcaa
gccgaagccttccttaacaaccaggaatatgtgttggctcatactgaaatgcccaccacc
ttggaaggagctgaagcagctataaaaaagcaagaggacttcatgactaccatggacgcc
aacgaggagaagatcaatgctgttgtagagaccggccggaggctggtgagcgatgggaac
atcaactcggatcgcatccaagagaaggtggactctatcgatgacagacacaggaagaat
cgtgaggcagccagtgaactcctgatgagattgaaggacaacagggaccttcagaagttc
ctgcaggattgtcaagagctgtccctctggatcaatgaaaagatgcttacagcccaggat
atgtcgtatgatgaagccaggaatctgcatagcaaatggttaaaacatcaagcatttatg
gcagaacttgcatccaacaaagaatggcttgacaaaattgagaaggaaggaatgcagctc
atttcagaaaagcccgagacagaagctgtggtaaaggagaagctcacaggtctgcacaag
atgtgggaagtccttgaatccactacccagaccaaggcccagcggctcttcgatgcgaac
aaggctgaactcttcacccagagctgtgcagatctcgacaaatggctgcacggcttggag
agccagatccagtctgacgactatggcaaggacctgaccagtgtcaacatcctgctgaaa
aagcaacagatgctggagaaccagatggaagtgcggaagaaggagatcgaggagcttcag
agccaggcacaggccctgagtcaggagggcaagagcaccgatgaggtggacagcaagcgc
ctcacggtgcagaccaagttcatggagttgctggagcccttgaacgagaggaagcataac
ctgctggcttccaaagagatccatcagttcaacagggacgtggaagatgagattctgtgg
gttggcgagaggatgcctttggcaacctccacggatcatggccacaacctccagaccgtg
cagctcctaatcaagaaaaatcagaccctccagaaagaaatccaggggcaccagcctcgc
attgatgacatctttgagcggagccagaacattgtcaccgacagcagcagcctcaatgca
gaggccatccggcagcggcttgccgacctgaagcagctgtggggccagctcatcgaagag
accgagaagcgccacaggcggctggaggaagcccacagggcccagcagtactacttcgat
gcggctgaggccgaggcatggatgagcgagcaggagctatacatgatgtctgaggagaag
gccaaggatgagcagagtgccgtctccatgttgaaaaaacaccagattctggagcaagct
gtggaggactatgcagagactgtgcatcagctctccaaaaccagccgggccctggtggct
gacagccatcccgaaagcgagcgcattagcatgcggcagtccaaagtagacaagctgtac
gctggcctgaaggacctcgccgaagaaaggagaggcaagctggacgagaggcacaggtta
ttccagctgaaccgggaggtggacgacctggagcagtggattgctgagagggaagtggtc
gcagggtcccatgagctggggcaggactacgagcatgtgacgatgttgcaagaaagattt
cgggaatttgcccgagacacgggcaacattgggcaggagcgtgtggacacagtcaatcac
atggccgatgagcttatcaactcgggacattcagatgcagccacaattgctgagtggaag
gacggcctcaatgaagcctgggctgacctcctggagctcatcgacacaagaacacagatc
ctggccgcctcctacgaactgcataagttttaccatgatgccaaggagatctttggacgc
atccaggacaaacacaagaaactcccggaggagctcgggcgtgatcagaacacagtcgag
accttgcagagaatgcacaccacatttgagcatgacatccaggccctgggcactcaggtc
aggcagttgcaggaggacgcagcccgcctgcaggccgcctatgctggcgacaaggcagac
gacatccagaagcgtgagaacgaagtcctggaggcctggaaggccctgctggatgcctgc
gagggccgcagggtacggctggtggacacaggggacaagttccgcttcttcagcatggtg
cgtgacctcatgctgtggatggaggatgtcattcggcaaattgaggcccaagagaagccc
agggatgtgtcatccgttgaactgttaatgaacaatcatcaaggtatcaaagctgaaatt
gatgctcgtaatgacagcttcacaacctgcattgaacttgggaaatccctgttggcgagg
aaacactacgcctccgaggagatcaaggaaaagttactgcagttgacagaaaagagaaaa
gagatgatcgacaagtgggaagaccgatgggagtggttaagactgatcttggaggtccat
cagttctcaagggatgccagcgtggctgaggcctggctgctgggacaggagccctaccta
tccagccgagaaataggccagagcgtggacgaggtggagaagctcatcaagcgccacgag
gcatttgagaagtctgcagccacctgggacgagaggttctccgccctggagcggctgacg
acgttggagttactggaagtgcgcagacagcaagaggaggaagagaggaagaggcgaccg
ccttctcctgagccaagcacaaaggtttcagaggagaccgagtcccagcaacagtgggat
acttcaaaaggagaacaagtttcccagaatggtttgccggctgaacagggatctccacgg
atggcagatgcggcagacatgagcgacatggtcaatggcgctgccgagcagaggacaagc
tccaaggagtccagccccatcccctcccccacctctgatcgcaaagccaagaccagcttc
tcgacccagagtgccgccaccttgccggccagaacccaggagacgccctcagcccagatg
gaaggtttcctgaatcggaagcacgagtgggaggcccacaacaaaaaagcctcgagcagg
tcctggcacaacgtctattgtgtcatcaacaaccaagagatgggtttctacaaagacgcc
aagactgcggcgtcaggaattccctaccacagcgagctgcccgtgagtttgaaggaggcc
ctgtgcgaagtggccctggattacaagaagaagaaacacgtgttcaagctccggctaaat
gacggcaatgagtacctcttccaagccaaagatgatgaggaaatgaatgcctggatccag
gccatctcatcggccatctcctcggacaaacacgaagtgtccgccagcacacagagcacg
ccggcgtccagccgggcacagaccttgcccaccagcgtcgtcaccatcaccagcgagtcc
agtcccggcaagcgggagaaggacaaagaaaaagacaaagagaagcggttcagccttttc
ggcaaaaagaaatga
DBGET
integrated database retrieval system
