Ochotona curzoniae (black-lipped pika): 121165220
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Entry
121165220 CDS
T11174
Symbol
NPAS2
Name
(RefSeq) neuronal PAS domain-containing protein 2
KO
K09026
neuronal PAS domain-containing protein 2
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
121165220 (NPAS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocz03000
]
121165220 (NPAS2)
Transcription factors [BR:
ocz03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
121165220 (NPAS2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
PAS_9
bHLH_IRO3
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
121165220
NCBI-ProteinID:
XP_040849745
LinkDB
All DBs
Position
Unknown
AA seq
823 aa
AA seq
DB search
MDEDEKDRAKRASRNKSEKKRRDQFNVLIKELSSMLPGNTRKMDKTTVLEKVIGFLQKHN
EVSAQTEICDIQQDWKPSFLSNEEFTQLMLEALDGFIIAVTTDGSIIYVSDSITPLLGHL
PADVMDQNLLNFLPEQEHSEVYKMLSSHMLLTESPSPEYLKSDNDLEFYCHLLRGSLNPK
EFPTYEYIKFVGNFRSYNNVPSPSCNGFDTTLSRPCRVPLGKGVYFIATVRLATPQFLKE
MCIVDEPLEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCH
QHLMQFGKGKSCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHSVVSYADVRVER
RQELALEDPPEAMHPSTLKDKGSSLEQQQPFSTLDTGTSGLHTSPSPSASSRSSHKSSHT
AMSEPNSTPTKLMAEANTTTLPRSTTLPRELPGPGASQATTMPAPLPSASPCDITQQLLP
QTVVQSSPVPVAQFSAQFSMFQTIKDQLEQRTRILQANIRWQQEELHKIQEQLCLVQDSN
VQMFLQQPAVSLSFSSPQRPETQQQLQQRTSGSQPQLVVSPELSGQMTSAPVSSQHLLRE
SSVISTQGPKPLRSSQLLQGGGRPVGSLTSPFTSATAVLPPTLNLTTPAPASQEASPCQP
SPDFSHDRQLRLLLSQPIQPMMPGSCEARQSTEIGRTGRQVKYAQNQALFPSPDVHPASS
SSSTPILLMGQAVFHPSFPASQPSALQPAQAQQQPQQHYLQVQAPASLHSEQQDSFILST
YSQQPGTLSYGPLPPPPVQPQPQRPPRRLSSLSESTGLQQPPR
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagatgagaaagacagagccaagagagcttctcgaaacaagtctgagaagaag
cgtcgggaccagttcaatgttctcatcaaagagcttagctccatgctccctggcaacacg
cggaaaatggacaaaaccaccgtgctggaaaaggtcatcggattcttgcagaaacacaac
gaagtctcagcccaaacggaaatctgtgacattcagcaagactggaaaccttcattcctc
agtaatgaagaattcacccagctgatgttggaggcattggatggcttcattattgcagtg
acgacagacggcagcatcatctatgtctccgacagtatcacgcctctcctcgggcatttg
ccggcagatgtcatggatcagaacttgttaaacttccttccggaacaagaacactcagaa
gtgtataaaatgctctcttcgcatatgctcttgacggagtcaccctccccagaatactta
aaatctgacaacgatttagagttttattgccatcttctcagaggcagcttgaacccaaag
gaatttccaacttatgaatacataaaattcgtaggaaattttcgctcttacaacaatgtg
cctagcccctcctgtaatggcttcgacaccaccctctcaaggccgtgccgcgtgcctctg
ggaaagggagtctacttcattgccactgtgcgtctggcaacaccacagttcttaaaggaa
atgtgcatagttgatgaaccgctagaggaattcacttcaaggcatagcttggaatggaaa
tttttatttctggatcacagagcccctcccatcataggctacctgcctttcgaagtgctg
ggcacctcgggttatgactactaccacatcgacgacctggagctcctggccaggtgccac
cagcacttgatgcagtttggcaaaggcaagtcgtgttgctaccggtttctgaccaaaggg
cagcagtggatttggctgcagacgcactattacatcacctaccaccagtggaactccaag
cccgagttcatcgtgtgtacgcactcagtggtcagttacgcagatgtccgggtggaaagg
aggcaggaactggctttggaagacccacctgaggccatgcacccctcaacactaaaggac
aagggctccagcctggaacaacagcagcccttcagcacactggacacgggcacctccggc
cttcacaccagcccctctccatcagcgtcctcaagaagctcccacaagtcttcgcacacg
gccatgtctgaacccaactccaccccaaccaagctaatggcagaggccaacaccactact
ttgccaagatcaaccaccctaccccgagagttaccaggacctggggccagccaggccacc
acaatgccggctcctctgccatcagcgtcaccctgtgacatcacgcagcagctcctgcca
cagaccgtagtgcagagttctcctgtccccgtggcccagttctcagcacagttcagcatg
ttccagactatcaaagaccagctggagcagcggacacggatcctgcaggccaatatccgg
tggcagcaggaagagctgcacaagattcaggagcagctgtgcctggtccaggactccaac
gtccagatgttcctgcagcagccggctgtctccctgagcttcagcagcccccagcggcct
gagacccagcagcagctacagcaacggacttcagggtctcagccccagctcgtggtgagc
cctgagctctcggggcagatgacctcggccccggtcagcagccagcacctgctcagagag
tcgagtgtgatatcaacgcagggtcccaagccactgagaagctcacagctgctgcaaggg
ggcggccgcccagtgggcagtttgacgtccccgttcaccagtgccacggctgtgctgcca
ccaactctgaacttgaccacgcctgctcccgcctcccaggaggccagcccgtgccagccc
agtcccgacttcagccacgatcggcagctcaggctgttgctgagccagcctattcagccc
atgatgcctggatcttgtgaagcgaggcaatccacagagataggcaggactggacggcaa
gtcaagtatgcacagaaccaggccctgtttccaagcccagatgtgcaccctgccagcagc
agctcctccacccccatcctgctgatgggccaggccgtgtttcatcccagcttccctgca
tcccagccatcagccttgcagccagctcaggcccagcagcagccacagcagcactaccta
caggtgcaggcaccagcgtccttgcacagtgagcagcaggactcattcatcctctccacc
tactcccaacagccggggaccctgagctacggccctctgccaccgccccccgtgcagcca
cagccccaacgaccaccccgaaggctcagcagtctgtctgagtccactggcctccagcaa
ccaccccggtag
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