Ochotona curzoniae (black-lipped pika): 121165361
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Entry
121165361 CDS
T11174
Symbol
NPHP1
Name
(RefSeq) nephrocystin-1 isoform X1
KO
K19657
nephrocystin-1
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocz03037
]
121165361 (NPHP1)
Cilium and associated proteins [BR:
ocz03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
121165361 (NPHP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_1
SH3_2
SH3_9
hSH3
SH3_3
Nop53
Motif
Other DBs
NCBI-GeneID:
121165361
NCBI-ProteinID:
XP_040850009
LinkDB
All DBs
Position
Unknown
AA seq
688 aa
AA seq
DB search
MLARRPRDPLQALRRRNRELKQQVDSLLSESQLKGAVEPSKRRDIYQRCIQLKQTIDENK
NTLQKLSKADELAPVGSYNQRKEEERDLLDRLTQQLQELAVTISKENIAETEALTEKEED
ASSVEEEEEEEEESEESDEEEEESEKEEGEKQENKPRQQATSEGYVAIGDFTAQQAGDLT
FKKGEFLRVIEEKPDGWWVARNAKGNEGLVPRTYLEPCNKEEEEEEEEESSEEGSEDDVE
AGDEGIQGAEAKQRTDSHWSAVRKAVSEQITTVDVLTTMGAIPSGFRPSTLAQLLQEGNQ
FQASYFLQPELTSSQLAFRDLMWDAKAGTIRSIPSRVSLILTLWSCKMIPLPGTSIQVLS
RHVRLCVFDGSKVLSNIHTVRATWQPKKPKTWTFSPQVTGILPCLLDGDCFIRSNSSSPD
IGILFELGISYIRNSTGERGELSCGWVFLKLFDASGVPVPTKTYELFLNGGTPYEQGVEV
DPSVSRRAHGSVFHQMMMMRRQPQLLVKLRSLNARSRNVLSFLPETLIGSMCSIHLLIFY
RQILGDVLLKDRMSLQSAELISHPMLASFPKLLEQPDVMDALRSSWAEKENTLKRSEKRD
KEFLKAMFLLVYHDCALPLLHSTLLPPFKWAEEETEAARWKFIADFLKQNQENEGALQAL
LAPAGVHEPFDLSEQTYDFLGEVRKNVT
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgctggccaggcgtccgcgcgaccccctccaggccctgcggcgccgcaaccgggagctg
aagcagcaggttgatagtttgctttctgagagtcagttgaaaggagcagtagaacccagt
aaaaggagagatatttaccaaagatgtatccagttaaaacagacgatagatgaaaataaa
aacacacttcaaaaattaagcaaagccgatgaacttgcacctgtcgggagctataaccag
aggaaagaggaggagcgtgatcttttggataggctcacccagcaactgcaggaacttgct
gtcaccataagcaaagaaaatatagctgagactgaggcacttacagagaaagaggaagat
gccagttctgttgaggaagaggaggaggaggaagaagaaagtgaagaaagtgatgaggaa
gaagaagaatcagagaaggaagagggagagaagcaggaaaacaaacctcgccaacaggca
accagcgaaggatacgttgccattggagattttacggctcagcaagctggggatctgacg
ttcaagaaaggagaatttctccgtgtaattgaagaaaagcctgatggttggtgggtagcc
aggaatgccaagggcaatgaaggccttgttcccagaacctacctagagccttgtaataaa
gaagaggaggaggaagaggaggaagagtccagtgaggaaggcagtgaggatgatgtggag
gctggggatgaaggaatacagggagccgaagccaagcagaggacagattcccactggagt
gctgttcggaaagctgtctcagagcagatcaccactgtggatgtgttaaccaccatggga
gccatcccctctggattcaggccttccacactcgctcagcttctgcaggaggggaatcaa
tttcaagcaagttatttcttacaaccagaactcacgtcatcacagctggccttcagggat
ctgatgtgggatgctaaagcaggcactattaggtccatcccaagtcgtgtgtccttgatc
ctgacgttgtggagctgcaagatgattccgcttccggggacgagcatccaggtgctcagc
aggcacgtgcgcctctgtgtctttgacggcagtaaggtgctgagcaacattcatacagtc
agagccacgtggcaacccaaaaaacccaaaacgtggacattttctccccaggtgaccggc
atcctgccttgcttgcttgatggcgactgtttcattaggtctaattcttcgtctccagac
attggcatactatttgaacttggaatttcttatattcgtaattccactggtgaaagagga
gagttaagttgtggctgggtgtttctgaagctttttgatgccagtggtgttcctgttcca
acaaaaacctatgagctcttcttgaacggcggcactccttatgagcaaggagtggaagtg
gatccttctgtgtccaggagagcacatggtagtgtcttccatcagatgatgatgatgaga
cggcagcctcagctcctggtaaaactgagatccctgaacgcaagatcaagaaacgtacta
agtttcctgccagaaacgttgattggaagtatgtgttccatccacttgttgatattttat
cgacagattcttggagatgtactgctgaaagacaggatgagcttgcagagtgctgagctg
attagtcacccaatgctggccagcttccccaagctcttggagcagcctgacgtgatggac
gccctcaggagttcgtgggctgaaaaagaaaatacacttaaaagatcagagaagagagac
aaggagttcctgaaggccatgttcctgctggtctaccatgactgcgcgctccctctgctc
cattcgaccctcctgcccccgttcaagtgggcggaggaggagaccgaggccgcccgctgg
aagttcatcgccgatttcctgaagcagaaccaagaaaacgagggtgccctccaagccctg
ctggctccagctggagtgcacgaaccctttgacctctcggagcagacctacgacttcctg
ggtgaagtaaggaagaatgtgacgtga
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