KEGG   Ochotona curzoniae (black-lipped pika): 121165525
Entry
121165525         CDS       T11174                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
ocz  Ochotona curzoniae (black-lipped pika)
Pathway
ocz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ocz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121165525
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ocz03041]
    121165525
   04121 Ubiquitin system [BR:ocz04121]
    121165525
Spliceosome [BR:ocz03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    121165525
Ubiquitin system [BR:ocz04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    121165525
SSDB
Motif
Pfam: SART-1 HIND
Other DBs
NCBI-GeneID: 121165525
NCBI-ProteinID: XP_040850104
LinkDB
Position
Unknown
AA seq 808 aa
MGSSKKHRGEKEAAGTAAAAGAGGAPEQPPRHREHKKHKHRSAGGSSGGGSGERRKRSRE
RGAERGSGRRGADSEARGGTHGRDRSQAEPAERRVKREKRDDGYEAAASSKASSGDASSL
SIEETNKLRAKLGLKPLEVSAVKKEAGTKEEPVTADVINPMALRQREELREKLAAAKEKR
LLNQKLGKIKTLGEDDPWLDDTAAWIERSRQLQKEKDLAEKRAKLLEEMDQEFGVSTLVE
EEFGQRRQELYSARDLQGLTVEHAIDSFREGETVVLTLKDKGVLQEEEDVLVNVNLVDKE
RAEKNVELRKKKPGYLPYTDESVDDLAQQKPRSILSKYDEELEGERPQSFRLEQGGTADG
LRERELEEVRARLRLQAQSLSTVGPRVASEYLTPEEMVTFKKTKRRVKKIRKKEKEVVMR
ADDLLPLGDQSQDGDFGSRLRGRGRRRVPETEEEAPEEEAAKEPVPQLPPSDDTRVENMD
ISDEEEGDTLPPGSPEVLEEDEAELELQKQLEKGRRLRQLQQLQQLRDSGEKVVEFVKKL
ESRQRGWEEDEDPERKGAIVFNATSEFCRTLGEIPTYGLAGNREEQEELMDFERDEERSA
NGGSESDGEENLGWSTVNLDEEKQHQDFSASSTTILDEEPIVNRGLAAALLLCQNKGLLE
TTVQKVARVKAPNKSLPSAVYCIEDKMAIDDKYSRREEYRGFTQDFKEKDGYKPDVKIEY
VDETGRKLTPKEAFRQLSHRFHGKGSGKMKTERRMKKLDEEALLKKMSSSDTPLGTVALL
QEKQKAQKTPYIVLSGSGKSMNANTITK
NT seq 2427 nt   +upstreamnt  +downstreamnt
atgggctcgtccaagaagcaccgcggagagaaggaggccgcggggacggcggcggcggcc
ggcgctgggggcgcccccgagcagcctccgcggcaccgcgagcacaagaagcacaagcac
cggagtgcgggcggcagcagcggcggcggcagcggcgaacggcggaagcggagccgggag
cgcggggccgagcgcggcagcgggcggcgcggggccgactccgaggcccggggcggcacg
cacgggcgggatcgcagccaggcggagccggccgagcggcgcgtgaagcgggagaagcgc
gatgatggctacgaggccgctgccagctccaaagccagctctggcgatgcctcatccctc
agcatcgaggagaccaataagctacgggccaagttggggctgaaacccttggaagtcagt
gccgtcaagaaggaggcgggcaccaaggaggagcccgtgacggccgatgtcatcaacccc
atggccctgcgccagcgcgaggagctgcgggagaagctggcagctgccaaggagaagcgc
ctgctcaaccagaagctggggaagatcaagacactgggggaggatgacccctggctggac
gacactgccgcctggatcgaacggagccggcagctgcagaaggagaaggatttggcagag
aagagggctaaactgctggaggagatggaccaggagtttggtgtcagcaccctggtggag
gaggagtttgggcagaggcggcaggagctgtacagtgcccgggacctgcagggcctcaca
gtggagcatgccattgactccttccgcgagggcgagactgtggtcctcaccctcaaggac
aaaggtgtgctgcaggaggaggaggacgtgctggtgaacgtgaacctggtagacaaggag
cgggcagagaagaacgtggagctacgcaagaagaagccaggctacctgccatacacagac
gagagcgtggatgacctggcccagcaaaagcctcgctccatcctgtccaagtatgacgag
gagctcgagggcgagcggccacagtccttccgcctggagcagggcggcacggctgatggg
ctgcgggagcgggagctggaggaggtccgggcccggctgcggctgcaggcccagtccctg
agcaccgtggggccccgcgtggcctcggagtacctcacgcccgaggagatggtgaccttt
aaaaagaccaagcggagagtgaagaagatccgtaagaaggagaaggaggtggtgatgcgg
gccgatgacctgctgcccctcggggaccagagtcaagatggagacttcgggtccagattg
cggggccggggccggcgccgtgtgcccgagacggaggaagaggcccctgaggaggaggcg
gccaaggagcccgtgcctcagctgccgccatcagacgacacccgtgtggagaacatggac
atcagcgacgaggaggagggggacaccctgccccccggctcccccgaggtgctggaggag
gatgaggctgagctggagctgcagaagcagctggagaaggggcggcggctgcggcagcta
cagcagctacagcagttgcgagacagtggcgagaaggtggtggagtttgtgaagaagctg
gagtcgcggcagcgaggctgggaggaggatgaggacccggagcgcaagggggccatcgtg
ttcaatgctacgtcggagttctgccgcacgctgggcgagatccccacctacgggctggcc
ggcaaccgggaggagcaggaggagctcatggacttcgaacgagatgaggagcgctcggcc
aatggtggttctgagtcggacggggaggagaacctgggctggagcactgtgaacctggac
gaggagaagcagcatcaggatttctcagcctcctccaccaccatcctggacgaggagccc
attgtgaaccggggcctggctgccgctctgcttctgtgccagaacaaagggctgctggag
accacggtgcagaaggtagcccgggtgaaagcccccaacaagtctctgccgtcggccgtg
tactgcatcgaggacaagatggccatcgacgacaagtacagccggcgggaggagtaccgg
ggcttcacgcaggacttcaaggagaaggatggctacaagcccgatgtgaagatcgagtat
gtggacgagacgggccggaagctcacgcccaaggaggccttccggcagctgtctcaccgc
ttccacgggaagggctcgggcaagatgaagacggagcggcggatgaagaagctggacgag
gaggcgctcctgaagaagatgagctccagcgacacgcccctgggcacggtggcgctgctg
caggagaagcagaaggcccagaagacgccctacatcgtgctcagcggcagcggcaagagc
atgaacgcgaacaccatcaccaagtga

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