KEGG   Ochotona curzoniae (black-lipped pika): 121165538
Entry
121165538         CDS       T11174                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1-like
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
ocz  Ochotona curzoniae (black-lipped pika)
Pathway
ocz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ocz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121165538
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ocz03041]
    121165538
   04121 Ubiquitin system [BR:ocz04121]
    121165538
Spliceosome [BR:ocz03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    121165538
Ubiquitin system [BR:ocz04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    121165538
SSDB
Motif
Pfam: SART-1 HIND
Other DBs
NCBI-GeneID: 121165538
NCBI-ProteinID: XP_040850130
LinkDB
Position
Unknown
AA seq 813 aa
MGSSKKHRGEKEAAGTAAAAGAGGAPEQPPRHREHKKHKHRSAGGSSGGGSSGGGSGERR
KRSRERGAERGSGRRGADSEARGGTHGRDRSQAEPAERRVKREKRDDGYEAAASSKASSG
DASSLSIEETNKLRAKLGLKPLEVSAVKKEAGTKEEPVTADVINPMALRQREELREKLAA
AKEKRLLNQKLGKIKTLGEDDPWLDDTAAWIERSRQLQKEKDLAEKRAKLLEEMDQEFGV
STLVEEEFGQRRQELYSARDLQGLTVEHAIDSFREGETVVLTLKDKGVLQEEEDVLVNVN
LVDKERAEKNVELRKKKPGYLPYTDESVDDLAQQKPRSILSKYDEELEGERPQSFRLEQG
GTADGLRERELEEVRARLRLQAQSLSTVGPRVASEYLTPEEMVTFKKTKRRVKKIRKKEK
EVVMRADDLLPLGDQSQDGDFGSRLRGRGRRRVPETEEEAPEEEAAKEPVPQLPPSDDTR
VENMDISDEEEGDTLPPGSPEVLEEDEAELELQKQLEKGRRLRQLQQLQQLRDSGEKVVE
FVKKLESRQRGWEEDEDPERKGAIVFNATSEFCRTLGEIPTYGLAGNREEQEELMDFERD
EERSANGGSESDGEENLGWSTVNLDEEKQHQDFSASSTTILDEEPIVNRGLAAALLLCQN
KGLLETTVQKVARVKAPNKSLPSAVYCIEDKMAIDDKYSRREEYRGFTQDFKEKDGYKPD
VKIEYVDETGRKLTPKEAFRQLSHRFHGKGSGKMKTERRMKKLDEEALLKKMSSSDTPLG
TVALLQEKQKAQKTPYIVLSGSGKSMNANTITK
NT seq 2442 nt   +upstreamnt  +downstreamnt
atgggctcgtccaagaagcaccgcggagagaaggaggccgcggggacggcggcggcggcc
ggcgctgggggcgcccccgagcagcctccgcggcaccgcgagcacaagaagcacaagcac
cggagtgcgggcggcagcagcggcggcggcagcagcggcggcggcagcggcgaacggcgg
aagcggagccgggagcgcggggccgagcgcggcagcgggcggcgcggggccgactccgag
gcccggggcggcacgcacgggcgggatcgcagccaggcggagccggccgagcggcgcgtg
aagcgggagaagcgcgatgatggctacgaggccgctgccagctccaaagccagctctggc
gatgcctcatccctcagcatcgaggagaccaataagctacgggccaagttggggctgaaa
cccttggaagtcagtgccgtcaagaaggaggcgggcaccaaggaggagcccgtgacggcc
gatgtcatcaaccccatggccctgcgccagcgcgaggagctgcgggagaagctggcagct
gccaaggagaagcgcctgctcaaccagaagctggggaagatcaagacactgggggaggat
gacccctggctggacgacactgccgcctggatcgaacggagccggcagctgcagaaggag
aaggatttggcagagaagagggctaaactgctggaggagatggaccaggagtttggtgtc
agcaccctggtggaggaggagtttgggcagaggcggcaggagctgtacagtgcccgggac
ctgcagggcctcacagtggagcatgccattgactccttccgcgagggcgagactgtggtc
ctcaccctcaaggacaaaggtgtgctgcaggaggaggaggacgtgctggtgaacgtgaac
ctggtagacaaggagcgggcagagaagaacgtggagctacgcaagaagaagccaggctac
ctgccatacacagacgagagcgtggatgacctggcccagcaaaagcctcgctccatcctg
tccaagtatgacgaggagctcgagggcgagcggccacagtccttccgcctggagcagggc
ggcacggctgatgggctgcgggagcgggagctggaggaggtccgggcccggctgcggctg
caggcccagtccctgagcaccgtggggccccgcgtggcctcggagtacctcacgcccgag
gagatggtgacctttaaaaagaccaagcggagagtgaagaagatccgtaagaaggagaag
gaggtggtgatgcgggccgatgacctgctgcccctcggggaccagagtcaagatggagac
ttcgggtccagattgcggggccggggccggcgccgtgtgcccgagacggaggaagaggcc
cctgaggaggaggcggccaaggagcccgtgcctcagctgccgccatcagacgacacccgt
gtggagaacatggacatcagcgacgaggaggagggggacaccctgccccccggctccccc
gaggtgctggaggaggatgaggctgagctggagctgcagaagcagctggagaaggggcgg
cggctgcggcagctacagcagctacagcagttgcgagacagtggcgagaaggtggtggag
tttgtgaagaagctggagtcgcggcagcgaggctgggaggaggatgaggacccggagcgc
aagggggccatcgtgttcaatgctacgtcggagttctgccgcacgctgggcgagatcccc
acctacgggctggccggcaaccgggaggagcaggaggagctcatggacttcgaacgagat
gaggagcgctcggccaatggtggttctgagtcggacggggaggagaacctgggctggagc
actgtgaacctggacgaggagaagcagcatcaggatttctcagcctcctccaccaccatc
ctggacgaggagcccattgtgaaccggggcctggctgccgctctgcttctgtgccagaac
aaagggctgctggagaccacggtgcagaaggtagcccgggtgaaagcccccaacaagtct
ctgccgtcggccgtgtactgcatcgaggacaagatggccatcgacgacaagtacagccgg
cgggaggagtaccggggcttcacgcaggacttcaaggagaaggatggctacaagcccgat
gtgaagatcgagtatgtggacgagacgggccggaagctcacgcccaaggaggccttccgg
cagctgtctcaccgcttccacgggaagggctcgggcaagatgaagacggagcggcggatg
aagaagctggacgaggaggcgctcctgaagaagatgagctccagcgacacgcccctgggc
acggtggcgctgctgcaggagaagcagaaggcccagaagacgccctacatcgtgctcagc
ggcagcggcaagagcatgaacgcgaacaccatcaccaagtga

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