KEGG   Ochotona curzoniae (black-lipped pika): 121165639
Entry
121165639         CDS       T11174                                 
Symbol
EXOSC7
Name
(RefSeq) exosome complex component RRP42
  KO
K12589  exosome complex component RRP42
Organism
ocz  Ochotona curzoniae (black-lipped pika)
Pathway
ocz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ocz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    121165639 (EXOSC7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocz03019]
    121165639 (EXOSC7)
Messenger RNA biogenesis [BR:ocz03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     121165639 (EXOSC7)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     121165639 (EXOSC7)
SSDB
Other DBs
NCBI-GeneID: 121165639
NCBI-ProteinID: XP_040850270
LinkDB
Position
Unknown
AA seq 290 aa
MASVALSEAEKVYIVHGVQEDLRVDGRGCEDYRCVQVETDVVSNTSGSARVKLGHTDILV
GVKAEMGTPKLEKPNEGYLEFFVDCSANATPEFEGRGGDDLGTEIANTLYRIFNQGSLDL
KSLCISPREHCWILYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVSVVEDEEGSKEIE
LSDDPYDCIQLSVENVPCIVTLCKIGYRHVVDATLQEEACSLASLLVSVTSKGVVTCMRK
VGKGSLDPESIFEMMETGERVGKALHASLQSILHKEESLGPKRQKVGFLG
NT seq 873 nt   +upstreamnt  +downstreamnt
atggcgtccgttgcgctgagcgaggcggaaaaggtgtacatcgtgcacggcgtgcaggaa
gacctccgcgtggatggccgtggctgtgaggactaccgatgcgtccaagtggaaacagac
gtggtgtccaacaccagcgggtctgccagggtcaagctgggtcacacagacatcttggtg
ggagtgaaagcggagatggggacgccgaagctggagaaaccaaatgaaggctacctggag
ttctttgttgactgctcagccaatgccactccggagtttgaaggtcgaggaggtgatgac
cttggcaccgagatcgccaacaccctgtaccggatatttaaccagggcagcctggacctg
aagtcgctgtgcattagtcctcgggagcactgctggatcctctatgtggatgtgctgctg
ttggagtgcggtggcaatctgtttgatgccatttctattgctgtaaaggctgctctcttc
aatacaaggataccaagagtttctgttgtagaagatgaagaggggtcgaaggagattgaa
ctgtctgatgacccttacgactgtatccagctcagcgtggagaatgttccctgcatcgtc
accctgtgcaagattggctatcggcatgtggtggacgccactctccaggaggaggcctgc
tccttggccagcctgctggtgtcggtgaccagcaagggagtcgtgacgtgcatgaggaaa
gtaggcaagggcagcctggaccccgagagcatcttcgagatgatggagaccggcgagcgt
gtgggcaaggcgctgcacgcctccctgcagagcatcctgcacaaggaggagagcctgggg
cccaaaaggcagaaggtcggattcctgggatga

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