Ochotona curzoniae (black-lipped pika): 121165866
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Entry
121165866 CDS
T11174
Symbol
SEH1L
Name
(RefSeq) nucleoporin SEH1 isoform X1
KO
K14299
nucleoporin SEH1
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03013
Nucleocytoplasmic transport
ocz04150
mTOR signaling pathway
ocz05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121165866 (SEH1L)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
121165866 (SEH1L)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
121165866 (SEH1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocz03019
]
121165866 (SEH1L)
04131 Membrane trafficking [BR:
ocz04131
]
121165866 (SEH1L)
Messenger RNA biogenesis [BR:
ocz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121165866 (SEH1L)
Membrane trafficking [BR:
ocz04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
121165866 (SEH1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
ANAPC4_WD40
WDR55
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
121165866
NCBI-ProteinID:
XP_040850796
LinkDB
All DBs
Position
Unknown
AA seq
419 aa
AA seq
DB search
MFVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGEWHCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVK
FAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHSP
MIAVGSDDSSPNTMAKVQIFEYNENTRKYAKAETLMTVTDPVHDIAFAPNLGRSFHILAI
ATKDVRIFTLKPVRKELTSSGGPTKFEIRIVAQFDNHNSQVWRVSWNITGTVLASSGDDG
CVRLWKANYMDNWKCTGILKGNGSPVNGSSQQGNVNSSLGSNIPNLQNSLNGSSAGRNFF
APVDSPRAGSRWSSYAQLLPPPPLVEHACDADTANLQYPHPRRRYLSQPLNPLPENEGV
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtggcgcgcagtatcgcggcggaccacaaggacctcatccatgatgtctctttc
gacttccacggccggcggatggccacctgctccagcgaccagagcgtcaaggtctgggat
aaaagtgaaagtggggaatggcattgcactgcaagttggaagacacatagcggatctgtg
tggcgggtgacctgggcccatcctgagtttgggcaggtgttggcttcctgttcttttgac
cgaacagctgctgtttgggaggaaatagtaggagagtcaaatgataagctgcgaggacag
agtcactgggttaagaggacaactctggtggatagcagaacgtctgttaccgacgtgaag
ttcgcccccaagcacatgggtctcatgttagccacttgttcagcagacgggatagtgagg
atctatgaggccccggatgtgatgaatctcagccagtggtccctgcagcatgagatctcg
tgcaagctgagctgcagctgcatttcctggaatccatcaagctctcgggctcattctcct
atgattgccgtaggaagtgatgacagcagtccaaacacaatggccaaagttcagattttt
gaatacaatgaaaacaccaggaaatatgcaaaagctgaaactcttatgacagtcactgat
cctgtacatgatattgcatttgctccaaacttggggagatctttccatattctggcaatt
gcaaccaaagatgtgaggatttttacattaaaacctgtgaggaaagaacttacttcctct
ggtgggccaacaaaatttgaaatccgtatagtggctcagtttgataaccacaattctcaa
gtctggcgagtgagttggaatataacaggaacggtgctagcatcttcaggagatgatggc
tgtgtacgattgtggaaagctaactatatggacaattggaagtgcactggtattttgaaa
ggtaacgggagcccagtcaatgggagttctcagcagggaaacgtaaattcttccttaggt
tcaaatattccaaatcttcaaaactcgttaaatggatcgtctgctggcaggaatttcttt
gcccctgtggattccccacgggctggatcgagatggtccagttacgcccagctccttcct
cctcctcctctggtagaacacgcttgtgatgctgacactgccaacctccagtatcctcac
cctcgcagacgatatctttctcagcctcttaatccgttacctgagaatgaaggggtttaa
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