Ochotona curzoniae (black-lipped pika): 121166024
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Entry
121166024 CDS
T11174
Symbol
CHD7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocz03036
]
121166024 (CHD7)
Chromosome and associated proteins [BR:
ocz03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121166024 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
121166024
NCBI-ProteinID:
XP_040850990
LinkDB
All DBs
Position
Unknown
AA seq
2998 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLEGLGECGYPENPVNPMGQQMPIDQGFASLQPSLHHPSTN
QNQTKLTHFDHYNQYEQQKMHLMDQPNRMMSNAPGNGLASPHSQYHTPAVPQVPHGGSGG
GQMGVYPGMQNERHGQSFVDSGSMWGPRAVQVPDQIRAPYQQQQQQPQPQPPQTAPSGPP
AQGHPQHMQQMGSYLARGDFSMQQHGQPQQRMSQFSQGQEGLNQGNPFIATSGPGHLSHV
PQQSPSLAPSLRHSVQQFHHHPPTALHGESVAHSPRFSPNPPQQGTVRPQTLNFSSRSQT
VPSPTINNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPMNQSVPRYPNAVGFPSNSG
QGLMHQQPIHPSGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRPGSA
GIPMEVGSYPNMPHPQSSHQPPGAMGIGQRNMGPRNMQQSRSFMGMSAAPRELAGHMRPN
GCPGVGLADPQAIQERLISGQQHPGQQPSFQQLPTCPPLQPHPGLHHQSSPPHPHHQPWA
QLHPSPQNTPQKVPVHQHSPSEPFLEKPVPDMTQVSGPNAQLAKSDDYLPSIEQQPQQKK
KKKKNNHIIAEDPSKSFNKEDFPGGVNQELTRNSLDGSQEEKKKKKRPKVKKDPKEPKEP
KEKKEPKEPKTPKAPKIPKEPKEKKTKTATPKPKSSKKSSNKKPDSEASALKKKVNKGKT
EGSENSDLDKTPPPSPPPEEDEDPGVQKRRSSRQVKRKRYTEDLEFKISDEEADDADAAG
RDSPSNTSQSEQQESVDAEGPVVEKIMSTRSVKRQKESGEEVEVEEFYVKYKNFSYLHCQ
WASVEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVDRIMDFARSTDDRGE
PVTHYLVKWCSLPYEDSTWELRQDIDQAKIEEFEKLMAREPETERVERPPADNWKKSESS
REYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPF
LVIAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHA
IITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQN
TVEELFSLLHFLEPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLA
PKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLIN
GAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCL
DILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAAD
TCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVL
QSMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTIT
IESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVR
KQTRLYSAVKEDELMEFSDLESDSEEKPCVKPRRPQDKSQGYARSECFRVEKNLLVYGWG
RWTDILSHGRYKRQLTEQDVETICRTILVYCLNHYRGDENIKSFIWDLITPTADGQTRAL
VNHSGLSAPVPRGRKGKKVKAQSSQPVVQDADWLAGCNPDALFQEDSYKKHLKHHCNKVL
LRVRMLYYLRQEVIGDQADKILEGADSSEADVWIPEPFHAEVPTDWWDKEADKSLLIGVF
KHGYEKYNSMRADPALCFLERVGMPDAKAIAAEQRGADMLADGGDGGEFDREDEDPEYKP
TRTPFKDEIDEFANSPPEDKEESMEIHAAGKHSESNAELGQLYWPNTSTLTTRLRRLITA
YQRSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIISEKRQKWTRREEADFYRVVS
TFGVIFDPVKQQFDWNQFRAFARLDKKSDESLEKYFSCFVAMCRRVCRMPAKPDDEPPDL
SSMIEPITEERASRTLYRIELLRKIREQVLHHPQLGERLKLCQPSLDLPEWWECGRHDRD
LLVGAAKHGVSRTDYHILNDPELSFLDAHKNFAQNRGAGNISSLNPLAVGFGQAPPVISS
AHIQDEKVMDQAEGKAEESDNAVAKEKADGKDEEEETDSGGKANKQECEAEASSVKSELK
GAEGSVDPGSKSVSEKGSEEDEEEKLEDDDKSEESSQPEAGAVSRGKNFDEESNASMSTA
RDETRDGFYMEDGDPTVAQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNRRQM
FDFQGLIPSYTPVSMDSPLQKRSFAELSMVGQASISGSEDITTSPQLSKEDALSLSVPRQ
RRRRRRKIEIEAERAAKRRNLMEMVAQLRESQVVSENGQEKVVDLSKASREATSSTSNFS
SLTSKFILPNVTTPVSDAFKTQMELLQAGLSRTPTRHLLNGSLVDGEPPMKRRRGRRKNV
EGLDLLFMSHKRTSLSAEDAEVTKAFEEDIETPPIRNIPSPGQLDPDTRIPVINLEDGSR
LVGEDAPKNKDLVEWLKLHPTYTVDMPSYVPKNADVLFSSFQKPKQKRHRCRNPNKLDIN
TLTGEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSGFVPESM
FDRLLTGPVVRGEGASRRGRRPKSEIARAAAAAAAVASTSGINPLLVNSLFAGMDLTSLQ
NLQNLQSLQLAGLMGFPPGLATAATAGGDAKNPAAMLPLMLPGMAGLPNVFGLGGLLNNP
LSAATGNTTTASSQGEPEDGTSKVEEKGNENEDENKDSEKSTDAVSATDSANGSVGAATA
PAGLPSNPLAFNPFLLSTMAPGLFYPSMFLPPGLGGLTLPGFPALAGLQSAVGSGEEKAA
DKAEGGPFKDGENLEGSDAEGSLDKTVESSTLEDEAAQGEELDSLDGGDEIENNENDE
NT seq
8997 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccaggaatgatgagtctttttggcgaggatgggaatattttcagcgaaggc
ctggaaggccttggagaatgtggttaccctgaaaatccagtaaatcccatgggtcagcaa
atgccgatagaccaaggctttgcctccttacagccatcccttcatcacccctccactaat
cagaatcaaacaaagttgacccattttgatcactataatcagtatgaacaacaaaagatg
catctgatggaccagcctaacaggatgatgagcaatgcccctgggaacggactggcgtct
ccgcactcgcagtaccacacccctgccgttcctcaggtgccccacgggggcagtggcggc
ggtcagatgggagtctaccctggcatgcagaatgaaaggcacgggcagtcttttgtggac
agtggctccatgtggggcccccgggctgttcaggtaccagaccagatccgagccccctac
cagcagcagcagcagcagccacagccgcagccgccgcagacggctccgtcgggaccccct
gcacagggccaccctcagcacatgcagcaaatgggcagctatctggcacgtggggatttt
tccatgcagcagcatgggcagccacaacagaggatgagccagttttcccaaggtcaagag
ggccttaatcagggaaatcctttcattgccacctcaggacctggccacttgtcccacgtg
ccccagcagagtcccagcttggcaccttctttgcgtcactcggtgcaacagttccatcac
cacccccctactgctctccatggagaatccgttgcccacagtcccagattctccccaaat
cctcctcaacaagggactgttcggccacaaacccttaactttagttctcggagccagaca
gtcccctctcctactataaacaactcagggcagtattctcgatatccttacagtaaccta
aatcagggattagttaacaatacagggatgaatcaaaatttaggccttacaaataatact
ccaatgaatcaatcagtacctagataccccaatgctgtaggattcccatcaaacagtggt
caaggactaatgcaccagcagcccatccaccccagtggctcacttaaccaaatgaacaca
caaactatgcatccttcacagcctcagggaacttatgcctctccacctcccatgtcaccc
atgaaagcaatgagtaatccagcaggcactccacctccgcaagtcaggcccggaagtgct
gggataccaatggaagttggcagttatccaaatatgccccaccctcagtcgtctcaccag
ccccctggtgccatgggaatcggacagaggaatatgggccccagaaacatgcagcagtct
cgttcgtttatgggcatgtccgcggcaccgagggagttggccgggcacatgagaccaaat
ggttgtcctggtgttggccttgcagatccacaagcaatccaggaacgactgatatctggc
caacaacatcctggtcagcagccgtcttttcagcagctgcccacctgtcctccgctgcag
ccccacccaggcttgcatcaccagtcttcaccccctcaccctcatcaccagccttgggca
cagctccacccgtcaccccagaacaccccgcagaaagtgcctgtgcatcagcattctcca
tcggagccctttctagagaagcccgtgccggatatgactcaggttagtggaccgaatgcg
cagctcgcgaagagcgatgattacctgccgtcgatagagcaacagccacagcagaagaag
aagaagaagaaaaacaaccacatcattgcagaggatcccagtaaaagttttaataaagag
gacttccctggtggggttaaccaagaactaactaggaactcacttgatgggtcccaagaa
gaaaaaaagaaaaagaaaaggccgaaggtgaaaaaagacccgaaggaaccgaaagaacct
aaggagaaaaaagagcctaaggaacccaagaccccaaaagcccctaagattcccaaagag
ccaaaggaaaagaaaacaaaaactgccacgccaaaacccaaatccagcaagaagtcaagt
aataagaaacctgattcagaagcaagtgctttgaagaaaaaggtcaacaagggaaaaaca
gaaggttctgaaaattcagacttagacaaaacacccccaccatctcctcctcctgaagaa
gatgaggacccaggtgttcagaagagacggtccagcaggcaggtgaagagaaagcgctac
actgaagacttggagttcaagatttctgatgaggaggcagatgatgcagatgctgctggg
agagactccccgtccaacacttcacagtcagagcagcaggaatctgttgatgcagaaggc
cccgtggtagaaaaaatcatgagcactcgttcagtgaaaaggcagaaggagtctggagag
gaggtagaagttgaagaattctatgtgaaatacaaaaacttctcttaccttcattgtcag
tgggcttctgtggaagatctggagaaagataagagaatccagcagaagattaaacgattt
aaggcaaagcagggccagaacaaattcctttcagagattgaggatgagctttttaatcca
gattatgtggaggttgaccggatcatggactttgcacgtagcacagatgaccggggagag
cctgtgactcactatctggtgaagtggtgctcgcttccctatgaagacagcacgtgggaa
ctgaggcaggacatagaccaagccaagatcgaagagtttgagaagctcatggccagggag
ccggaaacagagcgtgtggagcgacctcctgctgataattggaagaaatcggagagttcc
agggagtataaaaataataacaaactcagggaataccagttggagggagtaaactggcta
cttttcaattggtacaacatgcgaaactgcattttagcagatgaaatgggtttgggaaaa
accatccagtctattacatttctctatgagatatatttgaaaggaatccatggccctttt
ttagtaattgccccattgtccacaatccccaactgggaaagggaattccgaacctggaca
gagttgaatgtggttgtgtatcatgggagtcaagctagtcgtcggaccattcagttgtat
gaaatgtacttcaaagatccccagggtcgagtaataaaggggtcctataagtttcatgcc
atcatcaccacatttgagatgattttgactgattgtcctgagctgcggaatattccatgg
cgctgtgtggtcattgatgaagcccacaggctgaagaataggaactgcaagctgttggaa
ggtctcaagatgatggacttggaacacaaagtgctgctgacaggaaccccactgcagaac
actgtggaagagctcttcagcttgcttcatttcttggaaccaagtcgcttcccttcggaa
accacctttatgcaggaattcggcgatctaaaaacagaagagcaggtgcaaaaacttcag
gctattctaaagccaatgatgttgagacgtctcaaagaagatgtagaaaagaacttggct
cccaaagaagaaactattattgaagttgaactaacaaacattcagaagaaatattaccga
gccatccttgagaagaattttacatttctttccaaaggtggtggacaagctaatgtacct
aaccttttaaacactatgatggaattacgaaagtgctgcaatcacccgtaccttatcaat
ggtgctgaagagaaaattttggaagagtttaaagaaacacacaatgcagagtctccagat
tttcagctccaggcaatgatccaggctgctggcaagctagtgctgattgacaagctgctg
ccgaaactgaaggctggtggccacagggtgcttatcttttcccagatggtgcgctgcttg
gacatactggaagactacctcattcagagacggtacccatacgaaaggattgatggccga
gtaagaggcaacctccgccaggcagctatcgacagattctccaagccagattctgatagg
tttgttttcctcctgtgtacgagagcaggaggcttaggcattaatctcactgctgctgat
acctgcatcatctttgattcagactggaatccccaaaatgacctacaggctcaggctaga
tgtcatagaataggacagagcaaatctgtgaaaatctacaggctgattacaagaaattcc
tatgaaagggagatgttcgacaaggctagtttgaagctgggtctggataaagctgtgctg
cagtccatgagtggaagagaaaatgctaccaatggggtacaacagctttccaagaaagaa
atagaggatcttctccggaagggggcctatggtgcgctcatggatgaggaggatgaaggc
tccaagttctgtgaagaggatattgatcagattctcctgcggcggacccatactattacc
attgagtccgaaggaaagggttccacatttgctaaggctagtttcgttgcgtccggaaat
aggacagatatttccttggatgatccaaatttctggcaaaagtgggctaagaaggctgaa
ctggatattgatgccttaaacgggaggaacaacctggtgatcgacactccaagagtgaga
aagcagaccaggctgtacagtgcagtgaaggaggacgagctgatggagttttcagacttg
gaaagcgattctgaagaaaagccctgtgttaagccacgacgcccccaggacaagtcacag
ggctatgcccggagtgagtgcttcagggtggagaagaatctgcttgtctatggctgggga
cggtggacagacatcctttcccatggacgctacaaacgtcagctcactgagcaagatgtt
gaaaccatctgcagaaccatcctggtgtactgtcttaatcattacagaggggatgagaat
atcaaaagcttcatctgggatctcatcacacccacggctgatggccagactcgagccttg
gtcaatcattccggtttatcagccccagtgccaaggggaagaaaagggaagaaggtgaag
gcccagagctcacagccagtggtacaggatgcagattggctggctggctgcaacccagac
gccctgttccaggaggacagctacaagaagcacttgaagcaccactgtaacaaggtcctg
ctgcgtgtccgcatgctgtactacctaagacaagaagttataggagaccaggcagataag
atcttagagggtgccgactcaagtgaagcagatgtttggatccctgaacctttccatgca
gaagttcctacagattggtgggataaggaggcagataaatccctcttaattggagtgttc
aaacatggctatgagaagtacaattccatgcgagctgaccctgcactgtgctttctggaa
cgagttggtatgcccgatgccaaggccatagctgctgagcagagaggagcagacatgcta
gcagatggtggtgacgggggagaatttgatagagaagatgaagacccagaatataagcca
acgagaacgccattcaaagatgaaatagatgaatttgccaattctccgccagaggataaa
gaggaatccatggaaatccatgccgcaggcaagcacagtgagagtaatgctgagttaggc
cagctgtactggcctaacacttcaaccctgactacacgtctgcgccggctcattactgcc
tatcagcgcagctataaaaggcaacaaatgaggcaagaggccctaatgaagactgaccgg
cgcaggcggcggcctcgggaggaagtgagagcgctggaggcggaaagggaagctatcata
tctgaaaaacggcaaaagtggacgaggagagaagaagctgatttttatcgtgtggtgtcc
acatttggggtcatttttgaccctgtgaaacagcagtttgactggaaccaatttcgagcc
tttgctagacttgacaagaagtctgatgagagtttggagaaatacttcagttgttttgtg
gccatgtgtaggcgagtgtgtcgaatgcccgcgaagccagatgatgagccgcctgacctc
tcctccatgatcgagccgatcacagaggagcgagcctccagaactctgtaccgcatcgag
ctgctgcggaagatccgcgagcaggtcctgcaccacccgcagctcggggagaggctgaag
ctctgccagccgagcttggacttgcccgagtggtgggagtgtgggaggcatgaccgtgat
ctcctggtgggtgctgctaagcatggggtcagtcggacagattatcacatcctcaatgac
cccgagttatcattcttggatgcacataaaaactttgctcagaacagaggggcaggtaat
atatcttccttgaacccactggcagttgggtttggccaagctcctcctgtcatctcatcg
gctcatattcaggacgagaaggtcatggaccaagctgaaggcaaagcagaggagtctgac
aatgctgttgccaaggagaaggctgacgggaaggatgaggaagaggagactgacagtgga
ggcaaggccaacaagcaggagtgtgaggctgaggccagctctgtgaagagtgagctcaaa
ggggcggagggcagtgtagaccctgggtccaagtctgtctcagaaaaaggttctgaagag
gatgaagaagaaaagctggaagatgatgataagtcggaagagtcctcccagcctgaagca
ggagctgtctctagagggaagaattttgatgaggaaagcaatgcttctatgagcactgct
agggatgaaacccgagatggattctacatggaggatggagatccgacagtagctcagctc
cttcatgaaagaacttttgccttctcattttggcctaaggatagagtaatgataaaccga
ttagataacatctgtgaagccgtgttgaaaggcaaatggccagtaaataggcgccagatg
tttgatttccagggcctcatccccagttacacacccgtctccatggacagtcccttgcag
aagaggagctttgccgagctctccatggtcggccaagccagcatcagtgggagtgaggat
atcaccacttctcctcagctgtcaaaggaagatgcgctcagcctctctgtgccccgccaa
cggaggaggaggagaaggaagattgaaattgaggccgaaagagccgccaagaggcgaaat
ctcatggagatggttgctcagctgcgagagtctcaggtggtctccgaaaatggacaagag
aaagttgtagatttatcaaaggcctcaagagaggcaacaagttctacctcaaatttttca
tctcttacttcaaaatttatcttgcctaatgtcacaacaccagtatctgatgcctttaag
actcaaatggaactgctccaagcaggcctttcgcgcacacccacaaggcatctgcttaat
ggctccctagtggatggagagcctcccatgaagaggaggcggggaaggaggaaaaacgtg
gagggccttgatctgcttttcatgagccacaaacggacgtcattgagtgcagaggatgct
gaggtgaccaaagcttttgaggaagatatagagaccccaccaataagaaacattccttct
cccggacagctggacccagacactcggatccctgttataaatctcgaagatgggagtaga
ctggtgggggaagatgctcctaaaaataaggatttagttgaatggttgaagctgcatcct
acttacactgttgatatgccaagttatgtaccaaagaatgcagatgtgctgttttcctca
tttcagaaaccgaaacagaagcgacatagatgtcgaaatcctaataagttggatatcaac
accttgacaggagaagaaagggtgcctgtggtcaataagcgaaacgggaagaagatgggt
ggagccatggcacctccaatgaaggacctccccaggtggctggaagaaaatcccgaattt
gcagttgctccagactggactgatatagttaagcagtctggttttgttcctgagtcgatg
tttgaccgtcttctcactgggcccgtggtgagaggagaaggagccagcaggagaggaaga
aggcccaaaagtgaaatcgccagggcagctgctgcggctgctgctgtcgcctccacttca
gggatcaaccctctgctggtgaacagcctgtttgctggaatggacctgacgagccttcag
aatctccagaacctccagtccctccagctggcaggtctcatgggcttccctccaggactg
gcgacagctgccaccgccggaggcgacgctaagaaccctgctgccatgctgcccctgatg
ctgccaggcatggcaggcctgcccaacgtgtttggactaggcgggctgttgaataaccct
ctctcagctgctactggaaacaccactactgcttctagtcaaggagaaccggaagacggc
acttcaaaagtagaagagaaaggaaatgagaacgaagatgagaacaaagactccgagaaa
agcacagatgctgtttcggctactgactctgcgaatggatctgttggtgctgctactgcc
ccggccggattgccctccaacccgctagccttcaaccctttcctcttgtccaccatggcc
ccaggcctcttctacccatccatgtttctacctccaggactggggggattgacgctgcct
gggtttccagcattggcaggactccagagtgccgtgggctccggggaagaaaaggctgct
gataaggccgaggggggccccttcaaagatggagagaaccttgaaggcagcgatgccgaa
gggagcctggacaagactgtggagtcttccaccttagaagacgaggctgcacagggcgaa
gagctggactcactggatgggggagatgaaatagaaaacaatgaaaacgatgaataa
DBGET
integrated database retrieval system
