Ochotona curzoniae (black-lipped pika): 121166068
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Entry
121166068 CDS
T11174
Symbol
BHLHE40
Name
(RefSeq) class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
121166068 (BHLHE40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocz03000
]
121166068 (BHLHE40)
Transcription factors [BR:
ocz03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
121166068 (BHLHE40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
Oscp1
Motif
Other DBs
NCBI-GeneID:
121166068
NCBI-ProteinID:
XP_040851037
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MERIPSAQPPPACLPKAPGLEPGDLPGMDFAHMYQVYRSKRGLKRGEDSKETYKLPHRLI
EKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTSLIEQQQQKILA
LQSGFQAGELSGRSVEAGQEMFCSGFQTCAREVLQYLANHEHARDLRSSQLVAHLHRVVS
ELLQPGPPRKPAEPATKAMDFKEKPASLAPGSEGPGKNCVPVIQRTFASSSGEQSGSDTD
TDSGYGGESEKMDGRGVHPHAGGGRHGRGFAAGERVSAIKQECEEPPTKKSRLQFSDDEG
PFGSSGDLLGSPFLGPHPHQPPFCLPLYLIPPSATAYLPMLEKCWYPTSVPVLYPGLNAS
AAALSSFVNPDKLPAPLLLPQRLPSPLPAHPAVDSSALLQALKQIPPLNLETKD
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggagaggatccccagcgcgcagccgcctcctgcctgcctacccaaagcgcccgggctg
gagcccggagacctccccgggatggatttcgcccacatgtaccaggtgtacaggtcgaag
cggggactgaagcggggagaggacagcaaggagacctacaaactgcctcaccggctcatt
gagaagaagagacgtgaccggattaatgagtgcatcgcgcagctcaaggacctgctgccc
gaacacctcaaacttacaactctgggccacttggagaaggcggtggtgctggagctgacc
ctgaagcacgtgaaagccctgaccagcctgattgagcagcagcagcagaagatcctggcc
ctgcagagcggcttccaggctggtgagctgtcggggcggagtgtcgaagcaggccaggag
atgttctgttcgggcttccagacctgcgcccgggaagtgctgcagtacctggccaaccac
gagcacgcccgggacctgaggtcctcccagctggtcgcccacctgcatcgcgtggtctct
gagctgctgcagcctgggcctcccaggaagccagccgagccagcaaccaaggccatggac
ttcaaggagaagccggcatccctggctcctggctccgaaggccctggaaagaactgtgtc
cccgtcatccagcggacattcgcgtcctcgagcggcgagcagagcggcagtgacacagac
acagacagcggctacggaggcgagtcggagaagatggacgggcgaggcgtgcatccccac
gcaggcggcggccgccacggacgtgggtttgctgcaggggagagggtcagcgccatcaaa
caggagtgtgaggagccacccaccaaaaagagccgcctgcagttctcggacgatgagggc
ccctttggcagcagtggggacctcctgggctcgcccttcctgggcccgcacccgcaccag
ccccccttctgcctgcccctgtacctgatccccccgtcggccaccgcctacctgcccatg
ctggagaagtgctggtaccccacctcggtgcccgtgctgtaccctgggctcaacgcctca
gccgctgccctctccagcttcgtgaaccccgacaagctgccggcacccctgctgctccct
cagagactcccctcgcccctgccagcccaccccgcggtcgactcttcggccctgctgcaa
gccctgaagcagatcccacccttaaacttggaaaccaaagactga
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