KEGG   Ochotona curzoniae (black-lipped pika): 121166103
Entry
121166103         CDS       T11174                                 
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
ocz  Ochotona curzoniae (black-lipped pika)
Pathway
ocz03013  Nucleocytoplasmic transport
ocz04141  Protein processing in endoplasmic reticulum
ocz04150  mTOR signaling pathway
ocz05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:ocz00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    121166103 (SEC13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    121166103 (SEC13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    121166103 (SEC13)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    121166103 (SEC13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocz03019]
    121166103 (SEC13)
   04131 Membrane trafficking [BR:ocz04131]
    121166103 (SEC13)
Messenger RNA biogenesis [BR:ocz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     121166103 (SEC13)
Membrane trafficking [BR:ocz04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    121166103 (SEC13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    121166103 (SEC13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    121166103 (SEC13)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_RIG_2nd EIF3I ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_EML NBCH_WD40 MIOS_WD40
Other DBs
NCBI-GeneID: 121166103
NCBI-ProteinID: XP_040851120
LinkDB
Position
Unknown
AA seq 322 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILVADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHLGHDSSVNSVCWAPHDYGLIL
ACGSSDGAISLLSYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPSYIK
KFASGGCDNLIKLWREDEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV
FIWTCDDASGSTWSAKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCI
SDVNKGQGSVSSSVSEGQQNEQ
NT seq 969 nt   +upstreamnt  +downstreamnt
atggtgtcagtaatcaacaccgtggacacctcgcacgaggacatgattcacgatgctcag
atggattactatggcacgcgcctggccacctgctcctctgacaggtccgttaagatcttt
gacgtgcgcaacgggggacagatcctcgtggctgacctcagaggacatgaagggcccgtg
tggcaggtggcctgggcccaccccatgtatggcaacatcctggcatcctgctcctatgat
cgcaaagtcatcatctggaaggaggagaatggcacctgggagaagacacatgagcacttg
ggccacgactcctcagtgaactcggtgtgctgggccccgcacgactatggcctcatcctg
gcctgcgggagctcagatggggccatctcactgctctcctacactggggaaggccagtgg
gaagtgaagaagatcaacaacgcgcacacgatcggctgcaatgctgtcagctgggcaccc
gctgtcgttccgggaagcctcatagaccagccctcggggcagaaacccagttacatcaag
aagtttgcctcgggaggatgcgacaacctcatcaagctgtggagggaggatgaggatggc
cagtggaaggaggagcagaagctggaggcgcacagcgactgggtccgtgacgtggcctgg
gccccctccatcgggctgcccaccagcaccattgccagctgctctcaggatggccgcgta
ttcatctggacgtgcgacgatgcctcaggcagcacctggtctgccaagttgctacacaag
ttcaacgatgtcgtgtggcacgtgagctggtccatcactgccaacatccttgcagtctca
gggggagacaataaggtgacactgtggaaggagtcggtggatgggcagtgggtgtgcatc
agtgacgtcaacaagggccaggggtctgtgtcctcgtccgtctcggagggccagcagaac
gagcagtaa

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