Ochotona curzoniae (black-lipped pika): 121166621
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Entry
121166621 CDS
T11174
Name
(RefSeq) histone deacetylase 5-like
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04371
Apelin signaling pathway
ocz04613
Neutrophil extracellular trap formation
ocz05034
Alcoholism
ocz05203
Viral carcinogenesis
ocz05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
121166621
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
121166621
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
121166621
05203 Viral carcinogenesis
121166621
09165 Substance dependence
05034 Alcoholism
121166621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocz03036
]
121166621
Enzymes [BR:
ocz01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
121166621
Chromosome and associated proteins [BR:
ocz03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
121166621
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
121166621
NCBI-ProteinID:
XP_040851767
LinkDB
All DBs
Position
Unknown
AA seq
1130 aa
AA seq
DB search
MLLVPKAQGLVEMLQTIYETESCFSADGTSGREPPLEILPRTLHSIPVAVEVKPVLPGTM
PSSLGGGGGGSPSPVELRGALGGPVDPVLREQQLQQELLVLKQQQQLQKQLLFAEFQKQH
DHLTRQHEVQLQKHLKQQQEMLAAKRQQELEQQRQREQQRQEELEKQRLEQQLLILRNKE
KSKESAIASTEVKLRLQEFLLSKSKEPTPGGLNHSLPQHPKCWGAHHASLDQSSPPQSGP
PGTPPSYKLPLLGPYDNRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGTVIS
TFKKRAVEITGAGPGVSSVCNSAPGSGPSSPNSSHGTIAENGFTGSVPNIPTEMLPQHRA
LPLDSSPNQFSLYTSPSLPNISLGLQATVTVTNSHLTASPKLSTQQEAERQALQSLRQGG
TLTGKFMSTSSIPGCLLGVALEGDAGPHGHASLLQHVLLLEQARQQSALIAVPLHGQSPL
VTGERVATSMRTVGKLPRHRPLSRTQSSPLPQSPQALQQLVMQQQHQQFLEKQKQQQQLQ
LGKILTKTGELPRQPTTHPEETEEELTEQQEALLGESTLTMPREGSTESESTQEDLEEEE
EEEEEEDCIQVKDEEGESGPEEGPDLEESSAAYKKLFTDAQQLQPLQVYQAPLSLATVPH
QALGRTQSSPAAPGSMKSPPDQPTKHLFTTGVVYDTFMLKHQCMCGNTHVHPEHAGRIQS
IWSRLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKLDSKKLLGPISQ
KMYAMLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGHH
AEESTAMGFCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLH
RYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFS
PDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICD
ASEACVSALLSVELQPLDEAVLQQKPNTNAVATLEKAIEIQSKHWSCVQRFAAGLGRSLR
EAQAGETEEAETVSAMALLSVGAEQAQAATATREHSPRSAEEPMEQEPTL
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggtgcccaaggcgcaagggctggtggagatgttgcagaccatctacgagaca
gaatcctgtttctcggcagatggcacatcaggccgggaaccacccttggagattttgccg
cggactttgcacagcatcccggtggcagtggaggtgaagccagtgctgccaggaaccatg
cccagctccctgggtggcgggggcggaggcagcccgagcccggtggagttgcggggtgct
ctgggcggccctgtggaccctgtgctgcgtgagcagcagctgcagcaggagcttctggtg
ctcaagcaacagcagcagctgcagaagcagctactgtttgctgagttccagaagcagcac
gaccacctgacccggcagcacgaggtccagctgcagaagcacctcaagcagcagcaggag
atgctggcagccaagcggcagcaggagctggagcagcagcggcagcgggagcagcagcgg
caggaggagctggagaagcagcggctggagcagcagctgctgatcctgcgcaacaaggaa
aagagcaaagagagcgccatcgccagcaccgaggtgaagctccggctccaggaattcctc
ttgtcaaagtcaaaggagcccacgccaggcggtctcaaccattccctcccacagcacccc
aaatgctggggagcccatcatgcttctttggaccagagttcccctccccagagcggcccc
ccagggacgcccccttcctacaaactgcctttgctcgggccctatgacaaccgtgatgac
ttccctctacgaaagacagcctctgagcccaacttgaaagtgcgttcgaggctaaaacag
aaggtggccgagcggagaagtagtcccctcttgcgtcgcaaggacgggactgttatcagc
accttcaagaagagggcggttgagatcacgggcgctgggcctggggtgtcgtctgtgtgt
aacagtgctcctggttccggccccagttcccccaacagctcacatggcaccattgccgag
aacggcttcaccggctcagtgcccaacatccccaccgagatgctcccccagcaccgggcc
ctccctctggacagctcccccaaccagttcagcctctacacgtctccctctctgcccaac
atctccctagggcttcaggccacggtcactgtcaccaactcacacctcaccgcctccccg
aagctgtcgacgcagcaggaggccgagaggcaggccctccagtccctgcggcagggcggc
acgctgacgggcaagttcatgagcacatcatccatcccaggctgcctgctgggtgtggcg
ctggagggtgacgctggcccccacgggcatgcctccttgctgcagcacgtgctgctgctg
gagcaggcccggcagcagagcgccctcatcgctgtgccgctccatgggcagtccccactg
gtgacaggggaacgtgtggccaccagcatgcggacagtgggcaagctcccacggcaccgg
cctctgagccgcacacagtcatcgccactgccgcagagtccccaggccttgcagcagctc
gtcatgcagcagcagcaccagcagttcctggagaagcagaagcagcagcagcagctgcag
ctgggcaagatcctcaccaagacaggggagctgcctaggcagcccacgacacacccggag
gagactgaggaagagctgacggagcagcaggaggccttgctgggggagagcactttgacc
atgccccgtgagggctccacggaaagtgagagtacccaggaggacctggaggaggaagag
gaggaggaggaagaggaggattgcatccaggtcaaggatgaggagggcgaaagcggcccc
gaggagggacctgacttggaggagtccagtgctgcttacaaaaagctcttcacagatgcc
cagcagctgcagcctctgcaggtgtaccaggcacccctcagcctggccactgtgccccac
caggccctgggccgcacccagtcctcacctgctgctcctgggagcatgaagagcccccca
gaccagcccactaagcacctcttcaccacaggtgtggtttacgacacgttcatgctgaaa
caccaatgcatgtgtgggaacacacacgtacaccctgagcacgccggccgcatccagagc
atctggtcccggcttcaggagacgggcctgctcagcaagtgtgagcgcattcgggggcgc
aaagctacactggatgaaatccagacagtgcactccgagtaccacactctgctctacggg
accagccccctcaaccggcagaagttggacagcaagaagctgctgggtcccatcagccag
aagatgtatgccatgctgccttgtgggggcatcggggtggacagtgacaccgtgtggaac
gagatgcactcgtccagtgccgtgcgcatggccgtgggctgcctcgtggagctggccttc
aaggtggctgcgggcgagctcaagaatggatttgccatcatccggcccccaggacaccac
gccgaggagtctaccgccatgggattctgcttcttcaactcggtagccatcacagccaaa
ctcttgcaacagaagctgaacgtgggcaaggtcctcattgtggactgggacattcaccat
ggcaatggcactcagcaagcattctacaatgacccctccgtgctctacatctccctgcat
cgctatgacaatggcaacttctttccgggctctggggctcctgaagaggttggtggagga
ccaggcgtggggtacaatgtgaatgtggcatggacgggaggtgtggatccccccattgga
gatgtggagtacctgacagccttcaggacagtggtgatgcccattgcccacgagttctca
cctgacgtggtcttagtctctgctgggtttgatgccgttgaaggacatctgtctccactg
ggtggctactctgtcaccgccagatgttttggccacttgaccaggcagctgatgacactg
gctgggggccgggtggtgctggccctggagggaggccacgacttgaccgccatctgtgat
gcctctgaagcctgtgtctcggctctgctcagcgtggagctgcagcccctagatgaggca
gtcttgcagcaaaagcccaacactaacgcagtggccacgctggagaaagccatcgagatc
cagagcaaacactggagctgcgtgcagaggtttgctgctggtctgggccgctccctgcga
gaggcccaggcaggtgagacggaggaggccgagactgtgagcgccatggccttgctgtca
gtgggggcagagcaggcccaggctgccaccgctacccgggagcacagtcccaggtcggca
gaggagcccatggagcaggagcccaccctgtga
DBGET
integrated database retrieval system
