Ochotona curzoniae (black-lipped pika): 121167025
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Entry
121167025 CDS
T11174
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121167025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocz03019
]
121167025
Messenger RNA biogenesis [BR:
ocz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121167025
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
121167025
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cluap1
DUF4407
Motif
Other DBs
NCBI-GeneID:
121167025
NCBI-ProteinID:
XP_040852315
LinkDB
All DBs
Position
Unknown
AA seq
741 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDQKQDRIEGLKRHIEKHRYH
VRMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALV
ATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQS
PAKNGSKPVHSTQQPQSPAVPPAYSGPPPAAPGNNGVPTPAAPASTLGPKASPAPSHNAG
TPAPYAQAVAPSAPSGPSSSQPRPPSVQPSGGAGAGSAGGSSGTGGGAGKQNGATSYSSV
VADSPAEAALGSSGGSSASSQALGAPSGPHNPPPSASKEPSAAAPAVAGGVAPGSGNTSG
GPSLLVPLSVNPPSSPTPSFSEAKAAGALLNGPPQFTAAPEIKAPEPLSSLKSMAERAAL
SSGIEDPVPTLHLTERDILLGSTSAPPASAQPPLQLSEVNIPLSLGVCPLGPVPLSKEQL
YQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTVEFYQRLSTETLF
FIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKW
GQRKKEGFTFEYRYLEDRDLQ
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagcgcaagctccaaggtgagattgaccgctgcctcaagaaggtgtccgag
ggcgtggagcaatttgaggatatctggcagaagctccacaatgcggccaacgcgaaccag
aaagaaaagtatgaggctgacctaaagaaggagattaagaagctgcaacggctgagggac
cagatcaagacatgggtcgcgtccaacgagatcaaggacaagaggcagctcatcgacaac
cgcaagctcatcgagacgcaaatggaacggttcaaagttgtggagcgagagaccaaaacc
aaagcttacagcaaggagggcctgggcctggcccagaaggtggaccctgcccagaaggag
aaggaggaggtcggccagtggctcacgaataccattgacaccctaaacatgcaggtggac
cagtttgagagcgaagtggagtcactgtcagtgcagacgcgcaagaagaaaggcgacaag
gatcagaagcaggaccgcatcgagggcctgaagcggcacatcgagaagcaccgctaccac
gtgcgcatgctcgagaccatcctgcgcatgctggacaacgattccatcctcgtggacgcc
atccgcaagatcaaggacgacgtggagtactacgtcgactcctcccaggaccccgacttc
gaggagaacgagttcctctacgacgacctggacctcgaggacattccacaggcgctggtc
gccacctcccccccgagccacagccacatggaggacgagatcttcaaccagtccagcagc
acacccacctccaccacctccagctcccccattccccccagcccggccaactgcaccacg
gagaactcggaagatgacaagaagaggggccgctcgacggacagtgaggtcagccagtct
ccagccaagaatggctcgaagcctgtgcacagcacccagcagccgcagtcccccgctgtg
ccgcccgcctactccggccccccgcctgctgcccctggcaacaacggggtccctacgcca
gcagcaccagccagcaccctggggcccaaggccagtcccgcccccagccacaacgccggt
actcctgccccctatgcccaggccgtggctccctcagcgcccagcgggcccagctcctcc
cagccccggccccccagtgtgcagccaagtgggggcgctggcgcaggcagtgctggcggc
agtagcgggactggtggaggtgctggcaagcagaatggtgccaccagttacagctcagtt
gtggcggacagccccgcagaggcagctctgggcagcagtgggggcagcagcgccagcagc
caggccctgggtgccccttcaggcccccacaaccccccacccagcgcctcgaaggagccc
agcgcagcagccccagcagtggcagggggcgtcgccccaggctcagggaacacctcaggg
gggcccagcctgctggtgccactgtccgtgaaccctcccagctccccgacgcccagcttc
agcgaggccaaggctgccggtgctctcctcaacgggcccccccagttcactgccgccccg
gagatcaaggcccccgagccactgagctctctcaagtccatggcggagcgagcagccctc
agctctggcatcgaggaccctgtgccaacgctgcacctcacggagcgagacatcctcctg
ggcagcacctcggcgcccccggcctcggcccagccaccgctgcagctctcggaggtcaac
atcccgctgtcgctgggcgtgtgtcccttggggcccgtgcccctcagtaaggagcagctg
taccagcaggccatggaggaggccgcctggcaccacatgccacacccctccgactcggag
cgcatccggcagtacctccccaggaacccctgccccacgcccccctaccaccaccagatg
ccgcccccgcactcggacacggtggagttctaccagcgcctgtccacggagacgctcttc
ttcatcttctactacctggagggcaccaaggcacagtacctggcagccaaggcgctgaag
aagcagtcgtggcggttccacaccaagtacatgatgtggttccagaggcacgaggagccc
aagaccatcaccgacgagttcgagcagggcacctacatctacttcgactacgagaagtgg
ggccagcgcaagaaggaaggcttcaccttcgagtaccgctacctggaggaccgggacctc
cagtga
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