Ochotona curzoniae (black-lipped pika): 121167086
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Entry
121167086 CDS
T11174
Name
(RefSeq) LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 5-like
KO
K22803
structural maintenance of chromosomes protein 5
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocz03400
]
121167086
DNA repair and recombination proteins [BR:
ocz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
121167086
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_21
AAA_29
AAA_25
ApoA-II
Motif
Other DBs
NCBI-GeneID:
121167086
NCBI-ProteinID:
XP_040852400
LinkDB
All DBs
Position
Unknown
AA seq
1033 aa
AA seq
DB search
MENFQTYDACEVSPGPNLNMIVGPNGTGKSSIVCAICLGLAGKPAFMGRADKVGFFVKRG
CLKGMVEIELFRASGNLVITREIDVTKNQSSWFINKKPTTQKVVEEQVAALNIQVGNLCH
FLPQDKVGEFAKLSKIELLEATEKSIGPPEMHMYHCELKNFREKEKQLEATCKEKTEYLE
KMIQRNERYKQDVERFYERKRHLDIIEMLEAKRPWVEYESVCQEYEEVKQARDAVKDEVK
RLKEGQIPMRQRMEEIEAQRHGLEAQIKQKAADIKEASQKCKQKRDLIERKDKHIEELQQ
ALIVKQNEEDDRQRRISNTCKMIADLQNELNSAENXENLQPQIEAVTNDLSQVQDEKALC
EGEIINRRREKQTLEKERKNVSDHILHFDHLMNQKEDKLRQRYRDTYDAILWLRSNRDKF
KQRVCEPIMLTINMKDNKNAKYIENHISSNDLRTFVFESREDMEVFLKEVRDNKKLIVNA
VIAPRSSHTARLPSRPLNKLKQYGFISYLRELFDAPDLVMSYLCYQYHIHEVPVGTERTR
EQIERVIQETRLQQFYTAEENYVVKTSFYSNKLISSNTALKEAQFLTVTVDLEQRRHLEE
QLKEITMKLQSVESELTGLCEKSKLLECRDNDLRQKKKGLLERKTKKRQLEQKIKSKQGS
LKLMEQDTCNLKEEEQKAATKIKEINIQKAKLVAELTNLMKICTSLYMQKVDLSLQNTTM
ICEKKRLKSDYMAVSSQLRLTEQRYGELDESRQRLLQKCKELMKRAQQVCDLGAEQTVSP
EYQTTFQDLPNTLDEIDALLTEERSRASCFMGLNPTQVVEEYMKREEEIEQLTEELQGKR
IELDKYRESISQVKERWLNPLKELVEKINEKFSNFFSSMQCAGEVDLHTENEEDYDKYGI
RIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPINEG
RVFEIIVNTACKENTSQYFFITPKLLQNLPYSEKMTVLFVYNGPHMLEPSKWNLKAFQRR
RRRITFTQPAQKS
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggagaacttccaaacatacgatgcctgcgaagtgtctcccggacccaacttaaacatg
atcgttggacctaatggaacaggaaagtcgagtattgtttgtgccatttgccttggacta
gcaggcaaacctgctttcatgggacgggcagataaggttgggttttttgtgaagagagga
tgtctcaaaggcatggtggaaattgaattgttcagggcttctggaaatcttgtaatcacc
cgtgagattgatgtgacaaaaaatcaatcctcttggttcatcaacaaaaaacctacaacc
caaaaagtagtagaagagcaggtcgcagccttaaatattcaagtgggcaatctctgtcac
ttcctgcctcaggacaaagttggagaatttgctaaacttagcaaaattgagctccttgaa
gccactgagaagtccatcggccccccggagatgcacatgtaccactgtgagctcaagaac
ttccgggagaaggagaagcagctggaggcaacatgcaaagagaaaactgagtatctagag
aagatgatccaaaggaatgaaagatacaaacaagatgtggaaaggttttatgaacggaaa
cgacatttagacataattgagatgcttgaagcaaaaaggccctgggtggaatacgaaagt
gtctgtcaggagtacgaggaagtgaagcaggcccgcgatgccgtgaaggacgaggtgaag
aggctgaaggagggccagatccccatgaggcagcggatggaggagattgaagcacagcgc
catggcctggaggctcagatcaagcaaaaggcagcagatatcaaggaagcatctcagaaa
tgcaaacagaagcgagacctcattgaaaggaaggataagcatattgaggagcttcagcag
gctttaatagtaaaacaaaatgaagaggatgaccgacaacgaagaataagtaatacctgc
aaaatgatagcagatttgcagaatgaactgaattcggctgaaaacnntgaaaatcttcag
cctcagattgaggctgtcacgaacgatctgagccaagttcaggatgaaaaggccttgtgt
gaaggcgagatcatcaacaggcggagagaaaagcagacattagagaaggaaagaaagaat
gtgagcgatcatatattgcattttgatcatcttatgaaccagaaggaggataagctgaga
cagaggtaccgtgacacctacgacgccatcttatggctgagaagcaacagagacaagttc
aagcagagggtgtgtgagcccatcatgctcacgatcaatatgaaagataataaaaatgcc
aagtatattgagaatcatatttcatcaaatgacttgagaacctttgtatttgagagtcga
gaagatatggaagttttcctcaaagaggtccgtgacaataaaaagctaatagtgaatgct
gtcattgctcccaggagctcacacacagccaggctgccctcgagaccgctcaacaaactc
aagcaatacgggtttatctcttacctacgagagctgttcgatgcaccagacctggtcatg
agctacctttgctaccagtatcacatccatgaagtccccgtgggaaccgaaaggacgaga
gaacagatcgagcgggtaatacaagaaactcgactgcaacaattttatacagcagaagaa
aactatgtggtgaaaacatctttctattcgaacaagcttatttccagtaatacggccctg
aaagaggcccagttcctcaccgtgactgtggacctggagcagaggaggcatttggaggag
cagctaaaggaaattactatgaagttgcagtctgtggagtcagaattgactggcttgtgt
gagaaaagcaagctcctggaatgcagagataatgacctgagacagaagaagaaggggctg
cttgagagaaagaccaagaagaggcagctggagcagaagatcaagtccaagcagggaagc
ttaaagctgatggaacaggatacctgcaacctgaaagaggaagaacaaaaagcggccacc
aaaatcaaagaaataaatattcaaaaggcaaaacttgttgctgaattaacaaacctaatg
aagatttgtacttcgttgtacatgcaaaaagttgatttaagtcttcaaaatactacaatg
atctgtgagaagaaaagattaaaatcagattatatggctgtgtcatcacaactacgcctc
actgagcagcgttatggtgagctggatgagagcagacagaggttactgcagaagtgcaag
gagctgatgaagagagcccagcaggtgtgcgacctgggtgccgagcagactgtgtccccc
gagtaccagacaactttccaagatcttccaaacaccttggatgaaattgatgctttgttg
accgaagaaagatcaagagcatcctgcttcatgggcctgaatcctacacaagtggttgaa
gaatacatgaaaagagaagaagaaatcgagcagttaactgaggaactacagggaaagaga
attgaactggataaatacagggagagcatctcccaggtaaaagaaaggtggcttaatcct
ttaaaggagctggtagaaaaaattaatgaaaaattcagcaatttttttagttctatgcaa
tgtgctggtgaagtggatctccatacagaaaatgaggaagactatgacaaatacggaatt
cgtattagagtcaagtttcgcagtagtactcagctgcatgaattaactcctcaccatcaa
agtggaggtgaaagaagtgtttctactatgctgtacctgatggcacttcaagagctgaac
aggtgtccattcagagtagttgacgaaattaaccagggaatggaccccatcaatgaaggg
agagtatttgaaatcattgtaaatactgcctgtaaagagaacacgtctcagtacttcttc
attacaccaaagctcctgcagaatcttccttactcggagaagatgacggtgttgtttgtc
tacaacgggccacacatgctggagccgagcaagtggaacttgaaggctttccaaagacgg
cggcggcgcatcacattcactcagcctgctcagaaatcttaa
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