Ochotona curzoniae (black-lipped pika): 121167428
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Entry
121167428 CDS
T11174
Symbol
SEMA6A
Name
(RefSeq) semaphorin-6A isoform X1
KO
K06842
semaphorin 6
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
121167428 (SEMA6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sema
PSI
DUF3481
Motif
Other DBs
NCBI-GeneID:
121167428
NCBI-ProteinID:
XP_040852800
LinkDB
All DBs
Position
Unknown
AA seq
1035 aa
AA seq
DB search
MRLEALLLSFTLLHLAGAGFPEDSEPISISHGNYTKQYPVFVGHKPGRNSTQRHRLDIQM
VMVLNRTLYIAARDHIYTVDIDTSHTEEIYCSKKLTWKSRQADVDTCRMKGKHKDECHNF
IKVLLRKNDDTLFVCGTNAFNPSCRNYKMDTLEPFGDEFSGMARCPYDAKHANVALFADG
KLYSATVTDFLAIDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDHGDYIYFFFREMA
VEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQAVT
DVIRIHGRDVVLATFSTPYNSIPGSAVCAYDMVDIANVFTGRFKEQKSPDSTWTPVPDER
VPKPRPGCCAGSSSLEKYSTSSEFPDDTLNFIKTHPLMDEAVPSIINRPWFLRTMVRYRL
TKIAVDTAAGPYQNHTVVFLGSEKGIILKFLARLGSNGFLNDSVFLEEMSVYNSEKCSYD
GVEDRRIMGMQLDRASSSLYVAFSTCVVKVPLGRCERHGKCKKTCIASRDPYCGWVKEGN
SCAHLSPSSRLAFEQDIERGNTDGLGDCHNSFVALNDMSTPLPDHDMSYNTVYGRSGSAL
PSSTTADAAARGGHESRAGLPDWTELLHPPGSTDPLGPMSSHNHQDKKGVIRESYLKGHD
QLVPVTLLAIAVILAFVMGAVFSGIVVYCVCDHRRKDAGSAQRKDKELPHSRRGSMSSVT
KLSGLFGDSQAKDPKPEAILTPLMHNGKLATPGGTAKVLIKADQHHLDLTALPTPESTPT
LQQKRKPSRGSREWERSQNLINACTKDMAPLGSPVIPTDLPLRASPSHIPSVVVLPITSQ
QGYQHEYVEQPKLSEVAQMALEEQGATLEYKTIKEHLSCKSPSHAVSLVEHLDGLPPKVP
QREASLGPQNGLSKRLEMHPSSSYGLDYKRSYPTNSLTRSHQVAALKRNNTNSSNSSHLS
RNPSFGRGDNPPPAPQRVDSIQAQPGTVARQPSLSGYSSLSRPGLKRTPSLKPDVPPKPS
LAPLSAPMKPGDTCT
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgaggttagaagccctgctgctctctttcacactgctgcacttggcgggcgccggcttc
ccagaagactctgagccaatcagtatttcgcatggcaactatacaaaacagtacccggtg
tttgtgggccacaagccaggacggaacagcacacagaggcacagactggacatccagatg
gtcatggtcttgaacagaaccctctacattgccgctagggaccatatttatactgttgat
atagacacgtcacacacagaagaaatttactgtagcaaaaaattgacatggaaatctaga
caggctgatgtcgacacgtgcagaatgaaggggaaacataaggacgagtgtcacaacttt
atcaaagtcctgctgcggaagaatgatgacacgctgtttgtatgcgggacaaacgccttc
aacccttcctgcaggaactacaagatggataccttggaaccattcggggatgaatttagt
gggatggcccggtgtccatacgatgcgaagcatgccaacgttgccctgttcgcagatggg
aaactgtactcggccactgtgacggacttccttgccatcgacgcagtcatctaccggagc
ctgggagacagccccaccctgcggaccgtcaaacatgattccaaatggctaaaagagccc
tactttgtgcaagcggtggaccacggcgactacatctacttcttcttcagggagatggcc
gtggagtacaacaccatgggcaaggtggtgttccccagagtggcacaggtgtgcaagaac
gacatgggcggctcgcagcgggtgctggagaagcagtggacctccttcctcaaggcccgc
ctcaactgctccgtgcccggcgactcacacttctacttcaacatcctgcaggccgtcacc
gacgtgatccgcatccacggccgtgacgttgtcctggcaaccttctccacgccttacaac
agtatccccggctctgctgtctgtgcctacgacatggtggacatcgccaatgttttcact
ggacgattcaaggagcagaagtcccccgactccacctggacgccagttcccgatgagcga
gttcccaagcccaggcctggctgctgtgcaggctcatcctccctagagaaatacagcacg
tccagcgagttcccggatgacaccttgaacttcatcaagacacacccactcatggatgaa
gcggtgccctccatcatcaaccggccgtggttcctgaggacgatggtcagataccgcctg
acaaaaatcgccgtggacaccgcagcggggccctaccagaaccacactgtggtgttcctg
gggtcggagaaggggatcatcttgaagttcttggccaggctgggcagcaatggcttcctc
aatgacagcgtcttcctggaggagatgagtgtctacaattctgagaagtgcagctacgat
ggtgtggaggaccggcggatcatgggcatgcagctggaccgcgcgagcagctctctgtat
gtggcgttctccacctgcgtggtcaaggtccccctgggccgatgcgaacggcatggcaag
tgcaagaaaacgtgcatcgcctctagagacccctactgtgggtgggtgaaggaaggcaac
tcctgtgcccatctgtcacccagcagcaggttggcattcgagcaggacatagagcgtggc
aacacggacggcctgggagactgtcacaattccttcgtggctctgaacgacatgtcaact
cctctaccagatcatgatatgtcttacaacacagtgtatgggcgctccggctccgccttg
cccagcagcaccacggcggacgcggcggctcgagggggccatgagtcccgggcagggctg
cccgactggacagagctgctccacccacctggcagcacagaccctttggggccaatgtct
tcccataaccaccaagacaagaagggagtgattcgagagagttacctcaaaggccacgac
cagctggttcccgtgacccttctggccatcgctgtcatcttggcgttcgtcatgggggcc
gtgttctcgggcatcgtcgtctactgcgtgtgcgaccaccggcgcaaggatgcgggctcg
gcgcagcgcaaggacaaggagctcccacactcccgccggggctccatgagcagcgtcacc
aagctcagcggcctcttcggggactcgcaggccaaagacccgaagcccgaggccatcctc
acgccgctcatgcacaatggcaagctggccacgcccgggggcacagccaaagtgctcatc
aaggctgaccagcaccacctggacctcacggccttgcccacaccggagtccacgcccacg
ctgcagcagaagcggaagcccagccggggcagccgggagtgggaacggagccagaacctc
atcaatgcctgcaccaaggacatggcgcccctgggctcgcccgtgatccccacggacctg
ccgctgcgggcctcacccagccacatccccagcgtggtggtcctgcccatcacctcgcag
cagggctaccagcacgagtacgtggagcagcccaagctgagcgaggtggcccagatggcg
ctggaggagcagggcgccacgctcgagtacaagaccatcaaggagcatttgagctgcaag
agccccagccacgcggtcagcctggtggagcacctggacggcctgccccctaaagtcccg
cagcgcgaggcgtcgctggggccgcagaacggcctgagcaagcggctggagatgcacccc
tcctcctcctacggcctggactataagaggagctaccccacgaactcgctcacccgcagc
caccaggtcgctgccctgaaaaggaacaataccaactcctccaactcctcccacctctcc
cgcaaccccagcttcggccggggggacaacccaccgcccgccccgcagagggtggactcc
atccaggcccagcccgggaccgtggccaggcaaccgagcctcagcggctacagctccctg
agcaggccggggctgaagcgcacgccctcgctgaagcccgacgtgccgcccaagccctcc
ctggcccccctcagcgcgcccatgaagccgggggacacgtgtacataa
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