Ochotona curzoniae (black-lipped pika): 121167531
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Entry
121167531 CDS
T11174
Symbol
VARS2
Name
(RefSeq) valine--tRNA ligase, mitochondrial isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121167531 (VARS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ocz01007
]
121167531 (VARS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocz03016
]
121167531 (VARS2)
Enzymes [BR:
ocz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
121167531 (VARS2)
Amino acid related enzymes [BR:
ocz01007
]
Aminoacyl-tRNA synthetase
Class I (U)
121167531 (VARS2)
Transfer RNA biogenesis [BR:
ocz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
121167531 (VARS2)
Prokaryotic type
121167531 (VARS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
121167531
NCBI-ProteinID:
XP_040852933
LinkDB
All DBs
Position
Unknown
AA seq
992 aa
AA seq
DB search
MPHLPLASLRPSLWGLRSSRGLRRLCPLSTQSQPHHGSPISRRNREAKQKRLREKQAALE
AGIAGESKTPAESSKAWSPKEVVLYEVPTEPGTKKDVSGPLPSAYSPQYVEAAWYSWWER
EGFFKPEYQALLPQSTGETFSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRGDQVLW
VPGCDHAGIATQTVVEKQLWREQGVRRHELSREDFLRAVWQWKEAKGGEICEQLRALGAS
LAWDRECFTMDVGFSLAVTEAFVRLHKAGLLYRSRQLVNWSCALRSAISDIEVESRALPG
RTELQLPGCPTPVSFGLLFSVAFPVDGEPDVEVVVSTTRPETLPGDVAVAVHPDDSRYTH
LHGRQLRHPLTGQLLPVITDPAVQPQMGTGAVKVTPAHSPADAEMGTRHGLCPQSAIAED
GTMTPLCGDWLQGLHRFVAREKIVSALQERGLFRGLQSHPMVLPVCSRSGDVVEYLLKSQ
WFVRCREMGDQAAKAMESGALEFNPAFHQKNWQHWFAHIGDWCVSRQLWWGHQIPAYQVV
EAKGDRQDCWVVGRTEAEARELAAALMGRPGAELTLERDPDVLDTWFSSALFPFAALGWP
QETPDLARFYPLSLMETGSDLLLFWVGRMVMLGTQLTGQLPFRKVLLHSMVRDGQGRKMS
KSLGNVLDPRDIIRGVELQVLQEKLRDGNLDPAELAIAAATQKKDFPHGIPECGTDALRF
TLCSHGALGGDLHLSVSEVLSCRHFCNKIWNALRFILNVLGEEFTPKPAEELCPASPMDA
WILSRLARTAQECERSFLTQELSLATHALHHFWLHNLCDVYLEAVKPQLLRSPRPQDPPQ
VLFSCADIGLRLLAPLMPFLAEELWQRLPPRPSGPLAPSICVAPYPSARSLEHWHQPELE
QHFSRIQEAVQVLRALRATYQLTKARPRVLLQSSEPQEQDVFQAFLEPLGTLAHCGAVNL
LAQGTVAPSGWAQASLSDTAEVYMELQVTTGA
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatttgcctctggcctcccttagaccatcactttggggtctcaggtcctcgcgg
ggcctccgcaggctctgtcccctttctacacagtcgcaaccccatcatggctctcccatc
tcccggaggaaccgagaggccaaacaaaagcgcctgcgagagaagcaggcggcgctggag
gccgggatagccggggagagcaagacacctgctgaatccagtaaggcctggagccctaag
gaggtggtgctgtatgaagtccctacagaacctgggacaaagaaagatgtctcgggccct
ctgccatcagcatacagccctcagtatgttgaggctgcctggtactcatggtgggagcga
gagggcttcttcaagccagaatatcaggccctgctgccgcagtccacgggggagacgttt
tccatgtgtatcccacctcccaacgtcacaggttccctgcacattggccatgcactcaca
gtggccatccaggatgccctcgtgcgctggcaccgtatgcgaggagatcaggtgctgtgg
gttcctggctgcgaccacgcaggaattgctacccagaccgtagtggagaagcagctgtgg
agggagcagggtgtgaggaggcatgagctgagccgggaggactttctcagggccgtgtgg
cagtggaaggaggcgaaagggggcgagatctgtgagcagctgcgtgccctgggcgcctcc
ctggcttgggaccgagagtgtttcactatggacgtgggcttctcgctggccgtgactgag
gcttttgtgcggctccacaaggcaggcttgttgtaccgaagccgtcagcttgtcaactgg
tcgtgcgccctaagatcagccatctctgacatagaggtggagagcagggctctgcctggc
cgcacagaactgcaactgcccggctgccccaccccggtgtccttcggccttctcttttct
gtcgctttccctgtggatggagagcctgatgtggaggttgtggtgagcaccacgaggccg
gagacgttgcctggagatgtggctgtggccgttcatcctgacgactcccgatacacacat
ctgcatgggcgacagcttcgtcacccgttgacagggcagcttctccctgtcatcaccgac
cctgcagtgcaaccgcaaatgggcactggggccgtgaaggtgacaccagctcacagtcct
gccgacgctgagatgggcacccggcatggcctgtgcccgcagagtgccattgcggaggat
ggcaccatgacacccctctgtggggactggctacagggccttcaccggtttgtggcccgg
gagaagattgtgtctgcattgcaggagcggggcctgttccggggtcttcagagccacccc
atggtgctgcctgtctgcagccggtcgggggatgtggtggaatacctgctgaagagccag
tggtttgtccgctgccgggaaatgggggaccaagctgccaaggctatggagtctggggcc
ctggagttcaatcccgccttccaccagaagaactggcagcactggtttgcccacattggg
gactggtgcgtctcccggcagctgtggtggggccatcagattccagcttaccaggtcgtg
gaggccaagggcgacaggcaggactgctgggtggttgggcggacggaggccgaggccaga
gagctagcagctgccctaatggggagacctggagcagagctgaccctggagagggaccct
gacgtcctggacacgtggttctcgtcggctctcttcccctttgctgctctgggctggccc
caggaaaccccagacctggctcgtttctacccgctgtcgcttatggaaacaggcagtgac
ctcttgctgttctgggtgggccgcatggtcatgctggggacccagctcacagggcagctc
ccctttcgcaaggtgcttctgcactccatggtccgagacgggcagggccggaagatgagc
aagtccttggggaatgtgctggacccacgggacatcatcagaggggtggagctgcaggtg
ctacaggagaagctgagagatgggaacctagaccctgcggagctggccattgcagccgcc
acgcagaaaaaggactttcctcatgggatccctgagtgtgggaccgatgccctgcgcttc
acactgtgttcccatggagccctggggggcgacttgcacctgtcagtctcagaggtcctg
agctgccgccatttctgcaacaagatctggaatgccctgcgcttcatcctcaacgtcctg
ggggaggaattcacaccaaaacctgcagaggagctgtgccccgcctcccccatggatgcc
tggatcctgagtcgtctggcccgcaccgcccaggagtgtgagcgcagcttcctcacacag
gagctctcgctcgccacccacgccctgcaccacttctggctgcataacctttgtgacgtc
tacctcgaggccgtgaagccccagctgttgcgctcgccccgcccgcaggacccccctcag
gtcctgttctcctgcgcggacatcgggctccgcctccttgccccgctcatgcctttcctg
gctgaggagctttggcagaggctgccccccaggcccagtggcccccttgcgcccagcatc
tgtgttgccccctaccccagtgcccgcagcctggagcactggcaccagcccgagctagag
cagcacttctcccgcatccaggaggctgtgcaggtgctgagggccctccgtgccacgtac
cagctcaccaaagcccggccccgagtgctgttgcagagttctgagccccaagagcaagat
gtcttccaggccttcctggaacccctgggcaccctggctcactgtggggccgtaaacctc
ttagcccagggtacggtggctccctctggttgggcccaagcctcactcagtgacaccgct
gaggtctacatggagctgcaggtgaccacaggggcctag
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