Ochotona curzoniae (black-lipped pika): 121167991
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Entry
121167991 CDS
T11174
Name
(RefSeq) 28S rRNA (cytosine-C(5))-methyltransferase-like isoform X1
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ocz03009
]
121167991
Enzymes [BR:
ocz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
121167991
Ribosome biogenesis [BR:
ocz03009
]
Eukaryotic type
Other ribosome biogenesis factors
121167991
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NSUN5_fdxn-like
NSUN5_N
Methyltr_RsmB-F
FtsJ
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
121167991
NCBI-ProteinID:
XP_040853667
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MGLYAAAASVLAGVDSRQGSAKGLVYASGFQNVKQLYALVCETQRYSAVLDAVIASAGLL
RAEKKLRPHLAKVLVYELLLGKGFRGGGGRWKSLLRRHQARLKAELARLKVRRGVSRNED
LVAAEGSQSGAASQVPRFVRVNTLKTHTEDAVDYFKRQGFSYQGRASGLDDLRTLQGKCF
LLDALLPELLVFPAHTDMHQHPLYQAGHLILQDKASCLPATLLAPPPGSHVIDACAAPGN
KTSHLAALMKNQGKIFAFDHDAKRLASMGTLLARAGVSCCELAEKDFLTVSPSDERYRKV
QYILLDPSCSGSGMVTRQLEQPGEGPPSKERLQALAGFQLRALCHALAFPALQRLVYSTC
SLCQEENEDVVQAALEQSAGTFRLAPALPAWPQRGLSTFPEAHHCLRACPESTLTGGFFV
AVFEREEMPSSAPEASAAAPEPPSPGPKRKRRRRKAAGDLCTAPGP
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggggctgtacgcggccgcggcgtccgtgctggccggggtggacagccgccagggttcc
gccaaggggctggtgtacgccagtggcttccagaacgtgaagcagctgtacgcactggtg
tgcgagacgcagcgctactccgccgtgctggacgccgtgatcgccagcgccggcctgctc
cgcgccgagaagaagctgcggccgcacctggccaaggtgctggtgtatgagttgttactg
ggcaagggtttccgcgggggtggcggccgatggaagtccctgctgcggaggcaccaggca
cggctcaaggccgagctggccaggctgaaggtccggcggggtgtgagcaggaatgaggac
ctagtggccgctgaggggtcccagtccggagcagcctcgcaggtgccgcgatttgtgcgc
gtgaacacgctcaagacccacactgaggatgcggtggactacttcaaaagacaaggcttc
tcctaccagggtcgggcctctggccttgacgacttgaggaccctgcaggggaaatgcttc
ctcctggacgccctgctgcctgagctgctggtgttccctgcccacacagacatgcaccag
cacccgctctaccaggctggccacctcatcctccaggacaaggccagctgcctcccagcc
acgctactagctcccccgccggggtcccacgtcatcgacgcctgtgccgcccccggcaat
aagaccagtcacttggcagctcttatgaagaaccaagggaagatctttgctttcgaccat
gatgccaagcggctggcatccatgggcacgttgctggcccgggctggtgtgtcctgctgc
gagctagctgagaaggacttcctgacggtctcaccctccgacgagcgctaccggaaggtc
cagtacatcctgctggacccctcttgcagtggctctggcatggtaacccgacagttggag
cagcccggggaaggaccccccagcaaggagcgcctgcaggcactggcaggtttccagctg
cgtgccctgtgccacgcacttgccttccctgccctgcaacgtcttgtctactccacatgc
tcgctgtgccaggaggaaaatgaggatgtggtacaggctgccctggagcagagtgcaggc
accttcaggctggctcccgcactgcctgcctggccccagcggggcctcagcacgttccca
gaggcccaccattgcctccgcgcctgccctgagagtacgctcaccgggggcttcttcgtt
gctgtgttcgaacgggaggaaatgcccagctcagcccctgaagccagcgcagcagcccct
gaaccgcccagcccaggtcccaagaggaagaggcggcggcggaaggcagcaggtgacctg
tgcactgcccctggtccatag
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