Ochotona curzoniae (black-lipped pika): 121168150
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Entry
121168150 CDS
T11174
Symbol
APEX2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocz03400
]
121168150 (APEX2)
Enzymes [BR:
ocz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
121168150 (APEX2)
DNA repair and recombination proteins [BR:
ocz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
121168150 (APEX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
121168150
NCBI-ProteinID:
XP_040853908
LinkDB
All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search
MLRVVSWNINGIRSPIPGVACQEPASCAAVAMGRILGELAADIVCLQETKVTRDVLTEPL
AIIEGYNSYFSFSRNRSGYSGVATFCKDSATPEAAEEGLSGLFATQNGDVGCYGNMDEFT
QDELRALDSEGRALLTQHKIRTQEGQERTLTLINVYCPHADPGKPERLTFKMRFYRLLQI
RAEALLASGSHVIILGDLNTAHRPIDHCDAINMEYFEEDPGRKWMDGLLSNPRCQDGSHG
GPFVDSFRHFQPKQERAFTCWSVVTGARLFNYGSRLDYVLGDRTLVIDTFQSSFLLPEVM
GSDHCPVGAVLSVSSLPAKQCPPLCTRFLPEFAGTQLKIVRFLVPREQAPTSEESASQLG
NQTRTQVRQNKARVRSARPRPHQVGSSRGQKNLMNYFQPSSNHPQTSPDSEPPRQPLADI
PVMPKAPEEEAMAKVVGGQAKALEVKSNKEVQMSFWKSVLGGPSPLPLCAGHKEPCVMRT
VKKPGPNLGRRFYMCARPRGPPNDPSARCNFFLWCMPS
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgagtggtgagctggaatatcaatgggatccgaagccccataccaggggtggca
tgccaggagcccgccagctgtgccgcggtggccatgggacgcattttgggcgagctggct
gccgatatcgtctgtctgcaggagaccaaagtgacgagagatgtgctgactgagcccctg
gctatcattgagggctataactcctatttcagcttcagccgaaaccgaagtggctattcc
ggtgtagccaccttctgtaaggacagcgctaccccagaggctgctgaagaaggcttgagt
ggcctgtttgccactcagaatggggacgtgggttgctatggaaacatggatgagttcacc
caagatgagctccgggctctggatagtgagggccgggccctcctcacacaacacaagatc
cgtactcaggaaggacaagagaggaccttgaccttaatcaacgtgtactgcccccacgcg
gatcctgggaagcctgaacgactgacctttaaaatgcgcttctatcgcctgctgcagatc
cgagcagaagcccttctggcatctggcagccatgtgatcattctgggtgacttgaatact
gcccaccgccccattgaccactgtgatgccatcaacatggagtactttgaagaggacccg
gggcgcaaatggatggatggcttgctcagtaacccgaggtgtcaggatggctctcatgga
gggccctttgttgatagcttccgccacttccagcccaagcaggagagggctttcacttgc
tggtcggtggtcactggcgcccgtcttttcaactatggttcacggcttgactacgtgctg
ggagacaggaccctggtcatagacactttccagagctccttcctcttgcctgaggtcatg
ggctcagaccactgccctgtgggcgcagtcttgagtgtgtcttctctacctgcaaagcag
tgcccacctctgtgtacccggttcctccctgaatttgcaggcactcagctcaagattgtt
cgcttcctagttccccgggaacaagctcccacatcagaggagtcagcatcacagctcggc
aatcaaactcggacacaggtacgccaaaacaaagcccgtgtccgctcagcccggcctcgg
ccacatcaagttggttccagcagaggtcagaagaacctgatgaattacttccagccctcc
tccaaccatcctcaaacctctcctgactcagaaccacctcgccagccactggcggacatc
cctgtgatgccaaaggctccagaagaggaggcaatggccaaagtggttggaggacaggcc
aaagctttagaagtcaaaagcaacaaggaggtacagatgtcgttttggaagtctgtgttg
gggggaccctcacccttgcccctgtgtgcaggccacaaggagccatgtgtcatgcgtact
gtgaagaagccaggccccaacctaggccgccgcttctacatgtgtgccaggccccgaggt
cctcctaatgacccctctgcccgctgtaatttcttcctctggtgcatgcccagctga
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